RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SPAG17Q6Q759 2223 aa2.97□□□□□ -1.93
CSDE1-208ENST00000524652 UBR5O95071 2799 aaPredicted RBP2.97□□□□□ -1.93
CSDE1-208ENST00000524652 PLXNA2O75051 1894 aa2.96□□□□□ -1.93
CSDE1-208ENST00000524652 ADAMTS9Q9P2N4 1935 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PLXNB3Q9ULL4 1909 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SYNJ2BP-COX16A0A087WUM0 186 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TCRBV7S3A2A0A539 114 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TMEM247A6NEH6 219 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HEPACAM2A8MVW5 462 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ANHXE9PGG2 379 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM72CH0Y354 149 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TRDMT1O14717 391 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 GRID2O43424 1007 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 DNPH1O43598 174 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ASNA1O43681 348 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HSF2BPO75031 334 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 LRCH4O75427 683 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 KRT36O76013 467 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MTA2O94776 668 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TMCC1O94876 653 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MOCS3O95396 460 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TRUB2O95900 331 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CALB1P05937 261 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CD48P09326 243 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC172P0C7W6 258 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MBL2P11226 248 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 KRT3P12035 628 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 DAOP14920 347 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ARSAP15289 507 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PDGFRAP16234 1089 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF12P17014 697 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PRKCHP24723 683 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HOXC13P31276 330 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CYLC1P35663 651 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ATP5C1P36542 298 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MATKP42679 507 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PTPN9P43378 593 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PPP3CCP48454 512 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PCP4P48539 62 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MARCKSL1P49006 195 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CXCR3P49682 368 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 NUMBP49757 651 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SULT1E1P49888 294 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CLCN5P51795 746 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 VCPP55072 806 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SLC8A3P57103 927 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 GSDMDP57764 484 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TAS2R40P59535 323 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 YWHAZP63104 245 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SLC25A11Q02978 314 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 EEF1A2Q05639 463 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FCHO2Q0JRZ9 810 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC173Q0VFZ6 552 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TAF12Q16514 161 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF284Q2VY69 593 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF718Q3SXZ3 478 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TBRG1Q3YBR2 411 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF672Q499Z4 452 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM133BQ5BKY9 247 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM76BQ5HYJ3 339 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 EFHC1Q5JVL4 640 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 C10orf120Q5SQS8 335 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM182AQ5T1J6 154 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HECTD3Q5T447 861 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC181Q5TID7 509 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM72AQ5TYM5 149 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM72DQ6L9T8 149 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CES5AQ6NT32 575 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 AADACL2Q6P093 401 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 DNAJC24Q6P3W2 148 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ARCQ7LC44 396 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FJX1Q86VR8 437 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM72BQ86X60 149 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM131BQ86XD5 332 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 TMTC1Q8IUR5 882 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MFSD6LQ8IWD5 586 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 BBS7Q8IWZ6 715 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZDHHC23Q8IYP9 409 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC170Q8IYT3 715 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF683Q8IZ20 524 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SIX6OS1Q8N1H7 587 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PYROXD2Q8N2H3 581 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ELMOD1Q8N336 334 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 C17orf53Q8N3J3 647 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CCDC185Q8N715 623 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HORMAD2Q8N7B1 307 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 LEMD2Q8NC56 503 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 OR52K2Q8NGK3 314 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 ZNF564Q8TBZ8 553 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 WFDC5Q8TCV5 224 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SLC2A12Q8TD20 617 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 FAM172AQ8WUF8 416 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 HMGB4Q8WW32 186 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 MRPS31Q92665 395 aaKnown RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 SMARCD2Q92925 531 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 CD101Q93033 1021 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 IGSF8Q969P0 613 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 KIAA1191Q96A73 305 aa2.96□□□□□ -1.94
CSDE1-208ENST00000524652 PGAP3Q96FM1 320 aaPredicted RBP2.96□□□□□ -1.94
CSDE1-208ENST00000524652 RPGRIP1Q96KN7 1286 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms