RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 GPR1P46091 355 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 CHRNB3Q05901 458 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 GTDC1Q4AE62 458 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 CCSMST1Q4G0I0 132 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 FKBP9P1Q75LS8 142 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 TRIM74Q86UV6 250 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 NLRP8Q86W28 1048 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 TRAPPC5Q8IUR0 188 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 MICU2Q8IYU8 434 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 OR56A3Q8NH54 315 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 MAGEE2Q8TD90 523 aaPredicted RBP13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 NELL1Q92832 810 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 FOXJ1Q92949 421 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 FBXL20Q96IG2 436 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 UGT2B28Q9BY64 529 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 OR2AG1Q9H205 316 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 IKZF5Q9H5V7 419 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 PPT2Q9UMR5 302 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 COL4A3Q01955 1670 aa13.34□□□□□ -0.27
LDLRAD3-202ENST00000524419 HEPACAM2A8MVW5 462 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 LZTS3O60299 673 aaPredicted RBP13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 PRMT3O60678 531 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 DEAF1O75398 565 aaPredicted RBP13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 LRATO95237 230 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 HSD3B1P14060 373 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 PRPS1L1P21108 318 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 HSD3B2P26439 372 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 IMPA1P29218 277 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 HNRNPFP52597 415 aaKnown RBP13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 NUP107P57740 925 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 HPCAP84074 193 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 DDX39BQ13838 428 aaKnown RBP13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 ZNF234Q14588 700 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 PDGFRLQ15198 375 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 DPY19L1Q2PZI1 675 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 GCNT7Q6ZNI0 430 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 SYT12Q8IV01 421 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 WDR20Q8TBZ3 569 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 FAM162AQ96A26 154 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 NPLQ9BXD5 320 aaPredicted RBP13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 EBPLQ9BY08 206 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 PRM3Q9NNZ6 103 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 SERHLQ9NQF3 203 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 THG1LQ9NWX6 298 aaKnown RBP13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 VPS29Q9UBQ0 182 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 CIDEBQ9UHD4 219 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 PCDHB14Q9Y5E9 798 aa13.33□□□□□ -0.28
LDLRAD3-202ENST00000524419 H0YIV9 168 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 CXCR6O00574 342 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 MYO1DO94832 1006 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 SLC16A8O95907 504 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 RPL10P27635 214 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 PDHA2P29803 388 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 NRIP1P48552 1158 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 PHC1P78364 1004 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 BIRC2Q13490 618 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 DCTN2Q13561 401 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ZNF658BQ4V348 819 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 DHRS4L2Q6PKH6 230 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 GET4Q7L5D6 327 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 DSG4Q86SJ6 1040 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 GPR180Q86V85 440 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 RNF175Q8N4F7 328 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 TERB1Q8NA31 727 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 FBXO15Q8NCQ5 510 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 PNPT1Q8TCS8 783 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 GAB3Q8WWW8 586 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 FGF13Q92913 245 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 NCLNQ969V3 563 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ISOC1Q96CN7 298 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 FAM120BQ96EK7 910 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 TBCDQ9BTW9 1192 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 KAT8Q9H7Z6 458 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 BRF2Q9HAW0 419 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 SGK2Q9HBY8 427 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 SPATA6Q9NWH7 488 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 LIMD1Q9UGP4 676 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ADGRE2Q9UHX3 823 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 RUVBL1Q9Y265 456 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 OTOL1A6NHN0 477 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 GRXCR1A8MXD5 290 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 C1QTNF3-AMACRE9PGA6 284 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 K7ESM1 405 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 PLK4O00444 970 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 MMP20O60882 483 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 SEC24DO94855 1032 aaPredicted RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ALBP02768 609 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 KIR3DL1P43629 444 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 PNLIPRP1P54315 467 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 SRSF11Q05519 484 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 DPTQ07507 201 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 PCDH1Q08174 1060 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ACSM2AQ08AH3 577 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 DUSP6Q16828 381 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 TMEM52BQ4KMG9 183 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 CCNYL2Q5T2Q4 361 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ACSM2BQ68CK6 577 aa13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ERN2Q76MJ5 926 aaKnown RBP13.32□□□□□ -0.28
LDLRAD3-202ENST00000524419 ANKRD46Q86W74 232 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms