RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	MS4A13	Q5J8X5	152 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	TTC23	Q5W5X9	447 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	UGT3A1	Q6NUS8	523 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLC2A7	Q6PXP3	512 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	PAQR3	Q6TCH7	311 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033		Q6ZSR9	355 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	GPRIN3	Q6ZVF9	776 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	CEP68	Q76N32	757 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	CHST15	Q7LFX5	561 aa	Predicted RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	KDELC2	Q7Z4H8	507 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	R3HCC1L	Q7Z5L2	792 aa	Known RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	WDR5B	Q86VZ2	330 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	C8orf59	Q8N0T1	100 aa	Predicted RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	SVOPL	Q8N434	492 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	CPA6	Q8N4T0	437 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	NKAP	Q8N5F7	415 aa	Known RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	OR56A4	Q8NGH8	313 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	OR6P1	Q8NGX9	317 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	OR4L1	Q8NH43	312 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	BRSK1	Q8TDC3	778 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	NANOS1	Q8WY41	292 aa	Known RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	SGCD	Q92629	289 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	PMEPA1	Q969W9	287 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	TBC1D20	Q96BZ9	403 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	CHFR	Q96EP1	664 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	NRBF2	Q96F24	287 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	SH3YL1	Q96HL8	342 aa	Predicted RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	RPL10L	Q96L21	214 aa	Known RBP	7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZNF583	Q96ND8	569 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	P2RY13	Q9BPV8	354 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLX1A	Q9BQ83	275 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	MGME1	Q9BQP7	344 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZYG11B	Q9C0D3	744 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	GABARAPL1	Q9H0R8	117 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	LINC00597	Q9H2U6	94 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	TOR3A	Q9H497	397 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	RAD21L1	Q9H4I0	556 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	GORASP2	Q9H8Y8	452 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	PARD6A	Q9NPB6	346 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	PFDN4	Q9NQP4	134 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	FAM118A	Q9NWS6	357 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	COMMD8	Q9NX08	183 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	ASIC5	Q9NY37	505 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	NUDT4	Q9NZJ9	180 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLAMF8	Q9P0V8	285 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	DNAJB9	Q9UBS3	223 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	RNF112	Q9ULX5	631 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	CRYL1	Q9Y2S2	319 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	CCL27	Q9Y4X3	112 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	ASB1	Q9Y576	335 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	TIMM22	Q9Y584	194 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	CPQ	Q9Y646	472 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	ARL5A	Q9Y689	179 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	ANKRD12	Q6UB98	2062 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	PLXNB3	Q9ULL4	1909 aa		7.62	□□□□□ -1.19
SPIDR-223	ENST00000524033	MTCL1	Q9Y4B5	1905 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	ZNF840P	A6NDX5	716 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	C16orf96	A6NNT2	1141 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	FAM220BP	B1ANY3	271 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033		M0QX08	132 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CDC7	O00311	574 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLC1A7	O00341	560 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	E2F3	O00716	465 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	LSM1	O15116	133 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	SLC16A6	O15403	523 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	B4GAT1	O43505	415 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	LRP3	O75074	770 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	UGT2B11	O75310	529 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	BCAS1	O75363	584 aa	Predicted RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	KATNA1	O75449	491 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	RSL1D1	O76021	490 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	RHOBTB1	O94844	696 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	OR4F21	O95013	312 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	MOCS2	O96007	188 aa	Predicted RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	EGF	P01133	1207 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	MT-ND1	P03886	318 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	CCDC159	P0C7I6	412 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PRSS56	P0CW18	603 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	HOXD9	P28356	352 aa	Predicted RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	RYK	P34925	604 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PIGA	P37287	484 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	MAPKAPK2	P49137	400 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	AGTR2	P50052	363 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	GZMM	P51124	257 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	HNRNPF	P52597	415 aa	Known RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	OXCT1	P55809	520 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	TBX4	P57082	545 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	YBEY	P58557	167 aa	Predicted RBP	7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	ERVPABLB-1	P60509	514 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	GNA12	Q03113	381 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	RAD51	Q06609	339 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PRKG2	Q13237	762 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	KCNAB2	Q13303	367 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	IL18R1	Q13478	541 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PTPRCAP	Q14761	206 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PLCL1	Q15111	1095 aa		7.61	□□□□□ -1.19
SPIDR-223	ENST00000524033	PCBP2	Q15366	365 aa	Known RBP eCLIP	7.61	□□□□□ -1.19	9e-7	■■■■■ 31
SPIDR-223	ENST00000524033	ZNF77	Q15935	545 aa		7.61	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms