RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 P2RX6O15547 441 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 CREG1O75629 220 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 FKBP9O95302 570 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 KLK3P07288 261 aaPredicted RBP17.09■□□□□ 0.33
CLK4-211ENST00000522556 GSTA2P09210 222 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 STX2P32856 288 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 BMPR2Q13873 1038 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 USP10Q14694 798 aaKnown RBP17.09■□□□□ 0.33
CLK4-211ENST00000522556 TSNQ15631 228 aaKnown RBP17.09■□□□□ 0.33
CLK4-211ENST00000522556 DEFB109BQ30KR1 87 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 C18orf21Q32NC0 220 aaPredicted RBP17.09■□□□□ 0.33
CLK4-211ENST00000522556 THEMIS2Q5TEJ8 643 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 CYS1Q717R9 158 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 ZUFSPQ96AP4 578 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 PDLIM5Q96HC4 596 aaKnown RBP17.09■□□□□ 0.33
CLK4-211ENST00000522556 CCDC138Q96M89 665 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 OR4K3Q96R72 315 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 CDC42EP4Q9H3Q1 356 aaKnown RBP17.09■□□□□ 0.33
CLK4-211ENST00000522556 GPAMQ9HCL2 828 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 ARL15Q9NXU5 204 aa17.09■□□□□ 0.33
CLK4-211ENST00000522556 HMX2A2RU54 273 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 C21orf140B9A014 251 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 H0YGG7 62 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 H7BY64 318 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 EIF2S1P05198 315 aaKnown RBP17.08■□□□□ 0.32
CLK4-211ENST00000522556 PTPN4P29074 926 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 HSD17B2P37059 387 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 ARF3P61204 181 aaPredicted RBP17.08■□□□□ 0.32
CLK4-211ENST00000522556 NCF4Q15080 339 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 ZC3H12BQ5HYM0 836 aaKnown RBP17.08■□□□□ 0.32
CLK4-211ENST00000522556 WASHC2DQ5SRD0 308 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 TLDC1Q6P9B6 456 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 TTLL10Q6ZVT0 673 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 ADCK2Q7Z695 626 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 C10orf90Q96M02 699 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 PRAP1Q96NZ9 151 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 ZFYVE21Q9BQ24 234 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 EFHD1Q9BUP0 239 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 SGPP1Q9BX95 441 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 FARSAQ9Y285 508 aaKnown RBP17.08■□□□□ 0.32
CLK4-211ENST00000522556 AP1M2Q9Y6Q5 423 aa17.08■□□□□ 0.32
CLK4-211ENST00000522556 ZNF839A8K0R7 811 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 ACSL3O95573 720 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 RHOXF2BP0C7M4 288 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 POU4F1Q01851 419 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 DLG1Q12959 904 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 SLMAPQ14BN4 828 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 ZKSCAN8Q15776 578 aaPredicted RBP17.07■□□□□ 0.32
CLK4-211ENST00000522556 HKDC1Q2TB90 917 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 COX15Q7KZN9 410 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 GSPT2Q8IYD1 628 aaKnown RBP17.07■□□□□ 0.32
CLK4-211ENST00000522556 SHISA5Q8N114 240 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 CEP112Q8N8E3 955 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 UHMK1Q8TAS1 419 aaKnown RBP17.07■□□□□ 0.32
CLK4-211ENST00000522556 PTERQ96BW5 349 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 FBXL8Q96CD0 374 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 OR2A5Q96R48 311 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 FMO2Q99518 471 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 RHOXF2Q9BQY4 288 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 NDC1Q9BTX1 674 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 NLNQ9BYT8 704 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 SPNS1Q9H2V7 528 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 CUTCQ9NTM9 273 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 TXNDC16Q9P2K2 825 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 NDOR1Q9UHB4 597 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 KCND3Q9UK17 655 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 SRPK3Q9UPE1 567 aa17.07■□□□□ 0.32
CLK4-211ENST00000522556 FITM1A5D6W6 292 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 CCNDBP1O95273 360 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 ITGB2P05107 769 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 CDH1P12830 882 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 ALAS2P22557 587 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 OR1D4P47884 311 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 MEF2AQ02078 507 aaPredicted RBP17.06■□□□□ 0.32
CLK4-211ENST00000522556 CHAF1BQ13112 559 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 OR4D1Q15615 310 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 PRTGQ2VWP7 1150 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 NKAIN1Q4KMZ8 207 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 FBXO48Q5FWF7 155 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 CPZQ66K79 652 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 NKAPQ8N5F7 415 aaKnown RBP17.06■□□□□ 0.32
CLK4-211ENST00000522556 OR56A3Q8NH54 315 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 MACROD1Q9BQ69 325 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 POPDC3Q9HBV1 291 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 TXLNGQ9NUQ3 528 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 ANKMY1Q9P2S6 941 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 MTRF1LQ9UGC7 380 aaKnown RBP17.06■□□□□ 0.32
CLK4-211ENST00000522556 TCFL5Q9UL49 500 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 NFU1Q9UMS0 254 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 RUVBL1Q9Y265 456 aaKnown RBP17.06■□□□□ 0.32
CLK4-211ENST00000522556 MRPS2Q9Y399 296 aaKnown RBP17.06■□□□□ 0.32
CLK4-211ENST00000522556 MAU2Q9Y6X3 613 aa17.06■□□□□ 0.32
CLK4-211ENST00000522556 SMG1Q96Q15 3661 aaKnown RBP17.06■□□□□ 0.32
CLK4-211ENST00000522556 A0A1B0GX78 115 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 FEZF1A0PJY2 475 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 KLF7O75840 302 aaPredicted RBP17.05■□□□□ 0.32
CLK4-211ENST00000522556 DNAJB5O75953 348 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 HBQ1P09105 142 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 RAB40ALP0C0E4 278 aa17.05■□□□□ 0.32
CLK4-211ENST00000522556 HIST1H2AGP0C0S8 130 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms