RNA–Protein interactions for RNA: ENST00000522227.5

CTNNA1-234, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-234ENST00000522227 GPR85P60893 370 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 ZNF658BQ4V348 819 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 C10orf62Q5T681 223 aaPredicted RBP10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 PLAG1Q6DJT9 500 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 H3F3CQ6NXT2 135 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 ARHGAP11AQ6P4F7 1023 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 CPEB2Q7Z5Q1 589 aaKnown RBP10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 TBC1D21Q8IYX1 336 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 PQLC3Q8N755 202 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 LINC01555Q8NAE3 123 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 KCTD6Q8NC69 237 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 TADA1Q96BN2 335 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 ZNF285Q96NJ3 590 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 COPS8Q99627 209 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 MENTQ9BUN1 341 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 ALKBH4Q9NXW9 302 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 FAM169AQ9Y6X4 670 aa10.4□□□□□ -0.74
CTNNA1-234ENST00000522227 CCL22O00626 93 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 NDC80O14777 642 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 PHF1O43189 567 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 PSMB5P28074 263 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 PKLRP30613 574 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 ITGA8P53708 1063 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 PPIDQ08752 370 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 RPA4Q13156 261 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 SLC25A35Q3KQZ1 300 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 MINDY4Q4G0A6 757 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 TCP11X2Q5H9J9 407 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 FIGNQ5HY92 759 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 B3GNT6Q6ZMB0 384 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 CPNE8Q86YQ8 564 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 ZC3H7AQ8IWR0 971 aaKnown RBP10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 SULF2Q8IWU5 870 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 SHISA5Q8N114 240 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 SLC5A8Q8N695 610 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 CLDN19Q8N6F1 224 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 AMER3Q8N944 861 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 IPMKQ8NFU5 416 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 NEK11Q8NG66 645 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 OR5K2Q8NHB8 316 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 CFAP61Q8NHU2 1237 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 LINC01560Q8TB33 94 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 ZNF592Q92610 1267 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 PERPQ96FX8 193 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 MIPEPQ99797 713 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 YIPF4Q9BSR8 244 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 VPS37BQ9H9H4 285 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 MKKSQ9NPJ1 570 aaPredicted RBP10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 HACD3Q9P035 362 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 FAM153AQ9UHL3 310 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 CDC14AQ9UNH5 594 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 SCINQ9Y6U3 715 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 ZANQ9Y493 2812 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 DNAJC13O75165 2243 aa10.39□□□□□ -0.75
CTNNA1-234ENST00000522227 SONP18583 2426 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 A0A0A6YYC8 382 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 A0A0A6YYK5 440 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 I3L1I5 382 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 PRPF4O43172 522 aaKnown RBP eCLIP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 PEX1O43933 1283 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 SRPX2O60687 465 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 AP2A1O95782 977 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 PRSS56P0CW18 603 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 BMP7P18075 431 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 ACADLP28330 430 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 CDKN1CP49918 316 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 RUNX1T1Q06455 604 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 DAZAP2Q15038 168 aaPredicted RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 FKBP15Q5T1M5 1219 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 KAZNQ674X7 775 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 NPNTQ6UXI9 565 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 LGI4Q8N135 537 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 OR13C4Q8NGS5 318 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 ELMO1Q92556 727 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 CYTH2Q99418 400 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 VN1R1Q9GZP7 353 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 RTN4Q9NQC3 1192 aaKnown RBP10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 FAM215AQ9Y5M1 114 aa10.38□□□□□ -0.75
CTNNA1-234ENST00000522227 LOC285095A0A1B0GVY8 99 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 A0A1W2PPR1 153 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 CLCA1A8K7I4 914 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 FAM166BA8MTA8 275 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 DNAJB6O75190 326 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 NFKB1P19838 968 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 CDK11BP21127 795 aaKnown RBP10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 TPP2P29144 1249 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 CYB561P49447 251 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 TAS2R50P59544 299 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 ACTN3Q08043 901 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 PIGHQ14442 188 aaPredicted RBP10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 SLC1A5Q15758 541 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 SYTL3Q4VX76 610 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 RTL6Q6ICC9 239 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 CAPN12Q6ZSI9 719 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 TAS2R42Q7RTR8 314 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 ANKRD37Q7Z713 158 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 ZNF227Q86WZ6 799 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 KIF2BQ8N4N8 673 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 MLKLQ8NB16 471 aa10.37□□□□□ -0.75
CTNNA1-234ENST00000522227 POGLUT1Q8NBL1 392 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms