RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 MPSTP25325 297 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 ARNTP27540 789 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 NMBRP28336 390 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 SLC26A3P40879 764 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 ETV5P41161 510 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 HALP42357 657 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 GFERP55789 205 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 DNAJB13P59910 316 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 PRAMEP78395 509 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 GALNT1Q10472 559 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 KLF10Q13118 480 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 EIF3IQ13347 325 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 SQSTM1Q13501 440 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 CUL3Q13618 768 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 GPR18Q14330 331 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 SEMA3AQ14563 771 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 RPE65Q16518 533 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 ZNF658BQ4V348 819 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 AP1ARQ63HQ0 302 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 METRNLQ641Q3 311 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 KLC3Q6P597 504 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 IGF2-ASQ6U949 168 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 CES3Q6UWW8 571 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 BNC2Q6ZN30 1099 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 ZNF574Q6ZN55 896 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 TMEM26Q6ZUK4 368 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 RAPH1Q70E73 1250 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 PIM3Q86V86 326 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 SLC22A9Q8IVM8 553 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 HOMEZQ8IX15 550 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 DEFB107AQ8IZN7 70 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 PGAM4Q8N0Y7 254 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 FBXO39Q8N4B4 442 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 CLDN19Q8N6F1 224 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 RCBTB1Q8NDN9 531 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 ADCY4Q8NFM4 1077 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 OR4D9Q8NGE8 314 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 OR6P1Q8NGX9 317 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 OR2L2Q8NH16 312 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 LKAAEAR1Q8TD35 194 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 SLC26A7Q8TE54 656 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 JPH3Q8WXH2 748 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 RSC1A1Q92681 617 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 PEX13Q92968 403 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 SH3KBP1Q96B97 665 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 AHCYL2Q96HN2 611 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 C12orf66Q96MD2 445 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 TTC1Q99614 292 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 TRIM56Q9BRZ2 755 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 MCMBPQ9BTE3 642 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 TRMOQ9BU70 441 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 LDHAL6BQ9BYZ2 381 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 TRIM4Q9C037 500 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 COG4Q9H9E3 785 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 UCK1Q9HA47 277 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 EFCAB1Q9HAE3 211 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 SLC24A3Q9HC58 644 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 CHRAC1Q9NRG0 131 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 PAPOLBQ9NRJ5 636 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 THSD1Q9NS62 852 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 C20orf96Q9NUD7 363 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 IMP3Q9NV31 184 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 UTP6Q9NYH9 597 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 TMEM216Q9P0N5 145 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 CNOT11Q9UKZ1 510 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 RAB26Q9ULW5 256 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 POMPQ9Y244 141 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 ACOT9Q9Y305 439 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 CFAP20Q9Y6A4 193 aaKnown RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 DNMT3AQ9Y6K1 912 aaPredicted RBP6.61□□□□□ -1.35
SPIDR-218ENST00000522222 PRSS21Q9Y6M0 314 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 COMMD3-BMI1R4GMX3 469 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 WDFY3Q8IZQ1 3526 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 PIKFYVEQ9Y2I7 2098 aa6.61□□□□□ -1.35
SPIDR-218ENST00000522222 DMXL2Q8TDJ6 3036 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CELSR3Q9NYQ7 3312 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 URB1O60287 2271 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 KLHL33A6NCF5 533 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CDRT15L2A8MXV6 281 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 G3V2L1 256 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 DENRO43583 198 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ITM2AO43736 263 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 OR1I1O60431 355 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 LYPLA1O75608 230 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 UBXN7O94888 489 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 FTH1P02794 183 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ERVK-10P10266 1014 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CCL4P13236 92 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 STMN1P16949 149 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 TYRP1P17643 537 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 XRCC1P18887 633 aaPredicted RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 ITGAXP20702 1163 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 RBMS1P29558 406 aaKnown RBP6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PEX19P40855 299 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 NSG1P42857 185 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CAPZBP47756 277 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PREPP48147 710 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 CSRP3P50461 194 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 SLC12A2P55011 1212 aa6.6□□□□□ -1.35
SPIDR-218ENST00000522222 PCBP4P57723 403 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms