RNA–Protein interactions for RNA: ENST00000522043.1

TOP1MT-215, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 499 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-215ENST00000522043 PLAC1Q9HBJ0 212 aa17.22■□□□□ 0.35
TOP1MT-215ENST00000522043 ATP13A2Q9NQ11 1180 aa17.22■□□□□ 0.35
TOP1MT-215ENST00000522043 C20orf96Q9NUD7 363 aaPredicted RBP17.22■□□□□ 0.35
TOP1MT-215ENST00000522043 FBXO5Q9UKT4 447 aa17.22■□□□□ 0.35
TOP1MT-215ENST00000522043 SNX12Q9UMY4 172 aa17.22■□□□□ 0.35
TOP1MT-215ENST00000522043 VPS4AQ9UN37 437 aa17.22■□□□□ 0.35
TOP1MT-215ENST00000522043 MAD1L1Q9Y6D9 718 aa17.22■□□□□ 0.35
TOP1MT-215ENST00000522043 NRDCO43847 1150 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 IGHEP01854 428 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 RNF224P0DH78 156 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 GABRB3P28472 473 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 RPA3P35244 121 aaPredicted RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 SKIV2L2P42285 1042 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 PRDX1Q06830 199 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 Q0VFX4 171 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 AIMP2Q13155 320 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 MRPL49Q13405 166 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 TSTA3Q13630 321 aaPredicted RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 HKDC1Q2TB90 917 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 HSP90AA5PQ58FG0 334 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 PRAMEF13Q5VWM6 474 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 ICE2Q659A1 982 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 PIWIL4Q7Z3Z4 852 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 PPIL6Q8IXY8 311 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 STT3BQ8TCJ2 826 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 SNRNP40Q96DI7 357 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 NAP1L3Q99457 506 aaPredicted RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 ZNF304Q9HCX3 659 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 SLAMF7Q9NQ25 335 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 FAM114A2Q9NRY5 505 aa17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 IARS2Q9NSE4 1012 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 CUEDC1Q9NWM3 386 aaPredicted RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 RUVBL1Q9Y265 456 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 UTP20O75691 2785 aaKnown RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 USP9YO00507 2555 aaPredicted RBP17.21■□□□□ 0.35
TOP1MT-215ENST00000522043 PRRC2CQ9Y520 2896 aaKnown RBP17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 IGLV3-12A0A075B6K2 115 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 BLACEA4D250 179 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 FFAR3O14843 346 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 GPR42O15529 346 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 P2RX6O15547 441 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 IVDP26440 423 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 IMPA1P29218 277 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 KLC1Q07866 573 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 DHX9Q08211 1270 aaKnown RBP17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 CRYMQ14894 314 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 TTLL9Q3SXZ7 439 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 VWA2Q5GFL6 755 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 PRMT9Q6P2P2 845 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 LAPTM4BQ86VI4 370 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 KCNMB4Q86W47 210 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 IGDCC3Q8IVU1 814 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 PRSS58Q8IYP2 241 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 SHISA5Q8N114 240 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 C2CD4AQ8NCU7 369 aaPredicted RBP17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 OR11G2Q8NGC1 345 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 NDNQ99608 321 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 DDX47Q9H0S4 455 aaKnown RBP17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 TRMT1Q9NXH9 659 aaKnown RBP17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 ADAMTS6Q9UKP5 1117 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 B3GNT3Q9Y2A9 372 aa17.2■□□□□ 0.34
TOP1MT-215ENST00000522043 SMAPO00193 183 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 CES2O00748 559 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 DNALI1O14645 258 aaPredicted RBP17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 HAT1O14929 419 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 FOXS1O43638 330 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 SEMA7AO75326 666 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 ZGLP1P0C6A0 271 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 ERVK-10P10266 1014 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 ENO3P13929 434 aaPredicted RBP17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 ITGA3P26006 1051 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 EFNA3P52797 238 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 MUM1Q2TAK8 710 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 RBM20Q5T481 1227 aaKnown RBP17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 IGFL2Q6UWQ7 119 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 Q6ZS92 163 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 CUZD1Q86UP6 607 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 PLD3Q8IV08 490 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 LMNTD2Q8IXW0 634 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 CSNK1A1LQ8N752 337 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 AMER2Q8N7J2 671 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 AMER3Q8N944 861 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 GRK7Q8WTQ7 553 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 COL26A1Q96A83 441 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 C8orf44Q96CB5 159 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 CABS1Q96KC9 395 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 WDR83Q9BRX9 315 aaKnown RBP17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 SEMA3GQ9NS98 782 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 ASF1BQ9NVP2 202 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 SLC17A6Q9P2U8 582 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 NXT1Q9UKK6 140 aaKnown RBP17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 SH2B3Q9UQQ2 575 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 NTNG1Q9Y2I2 539 aa17.19■□□□□ 0.34
TOP1MT-215ENST00000522043 MAST4O15021 2626 aa17.18■□□□□ 0.34
TOP1MT-215ENST00000522043 ICE1Q9Y2F5 2266 aa17.18■□□□□ 0.34
TOP1MT-215ENST00000522043 HIVEP3Q5T1R4 2406 aa17.18■□□□□ 0.34
TOP1MT-215ENST00000522043 USP27XA6NNY8 438 aa17.18■□□□□ 0.34
TOP1MT-215ENST00000522043 SYF2O95926 243 aaKnown RBP17.18■□□□□ 0.34
TOP1MT-215ENST00000522043 PGAM1P18669 254 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms