RNA–Protein interactions for RNA: ENST00000522013.5

CTNNA1-232, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-232ENST00000522013 TMEM126BQ8IUX1 230 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 SCML4Q8N228 414 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 GALNT16Q8N428 558 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 KLHL36Q8N4N3 616 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 TTC30BQ8N4P2 665 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 ZBTB2Q8N680 514 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 ATG16L2Q8NAA4 619 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 NEK11Q8NG66 645 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 PPP4R1Q8TF05 950 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 ZNF606Q8WXB4 792 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 TBC1D20Q96BZ9 403 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 HMCESQ96FZ2 354 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 MPP4Q96JB8 637 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 C9orf72Q96LT7 481 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 GBP5Q96PP8 586 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 NCAPGQ9BPX3 1015 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 MLPHQ9BV36 600 aaPredicted RBP4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 CHST8Q9H2A9 424 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 LIME1Q9H400 295 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 JKAMPQ9P055 326 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 ST6GALNAC2Q9UJ37 374 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 SUFUQ9UMX1 484 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 TBC1D30Q9Y2I9 924 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 HS3ST4Q9Y661 456 aa4.84□□□□□ -1.63
CTNNA1-232ENST00000522013 MPDZO75970 2070 aa4.84□□□□□ -1.64
CTNNA1-232ENST00000522013 ARID1AO14497 2285 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 A0A087WWL8 130 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 GOLGA6L3A6NEY3 463 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 PCDH17O14917 1159 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 SKAP2O75563 359 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 FYNP06241 537 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 KLK3P07288 261 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 SLC2A3P11169 496 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CYP11B1P15538 503 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CHRNB2P17787 502 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 OR1E1P30953 314 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CCR1P32246 355 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 GPD2P43304 727 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 FASLGP48023 281 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CARSP49589 748 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 ZNF75DP51815 510 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 ZNF135P52742 658 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 UCP3P55916 312 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 RAP2BP61225 183 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 PITX1P78337 314 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 ARF5P84085 180 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 RAD51Q06609 339 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 GPS2Q13227 327 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 NFYCQ13952 458 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 HABP2Q14520 560 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 PRKD1Q15139 912 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 MEA1Q16626 185 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TMEM52BQ4KMG9 183 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 ZMAT1Q5H9K5 638 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CFAP58Q5T655 872 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CACHD1Q5VU97 1274 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TAF3Q5VWG9 929 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CES4AQ5XG92 561 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 LIN54Q6MZP7 749 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 SARM1Q6SZW1 724 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 LEKR1Q6ZMV7 388 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 NCCRP1Q6ZVX7 275 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 SETD3Q86TU7 594 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 KRTAP19-1Q8IUB9 90 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 KRTAP1-3Q8IUG1 177 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 VSTM4Q8IW00 320 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CARFQ8N187 725 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 WDTC1Q8N5D0 677 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 PPHLN1Q8NEY8 458 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 OR2AP1Q8NGE2 309 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CA5BP1Q8WTZ4 195 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 SLC20A1Q8WUM9 679 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 SLC35F5Q8WV83 523 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 MUL1Q969V5 352 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 LRRC46Q96FV0 321 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 RMND5BQ96G75 393 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 FER1L6-AS2Q96M78 137 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 ANP32EQ9BTT0 268 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TBC1D10AQ9BXI6 508 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TMEM120AQ9BXJ8 343 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TTYH3Q9C0H2 523 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TINAGL1Q9GZM7 467 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 BARX1Q9HBU1 254 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 WASH6PQ9NQA3 447 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 PHPT1Q9NRX4 125 aaPredicted RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TRNAU1APQ9NX07 287 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 DDIT4Q9NX09 232 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 FAM53CQ9NYF3 392 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 MPP6Q9NZW5 540 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 CNOT8Q9UFF9 292 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 TINAGQ9UJW2 476 aa4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 NOCTQ9UK39 431 aaKnown RBP4.83□□□□□ -1.64
CTNNA1-232ENST00000522013 FAM170AA1A519 330 aa4.82□□□□□ -1.64
CTNNA1-232ENST00000522013 UBE2QL1A1L167 161 aa4.82□□□□□ -1.64
CTNNA1-232ENST00000522013 CCDC78A2IDD5 438 aa4.82□□□□□ -1.64
CTNNA1-232ENST00000522013 CDHR4A6H8M9 788 aa4.82□□□□□ -1.64
CTNNA1-232ENST00000522013 MBD3L4A6NDZ8 208 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-232ENST00000522013 MBD3L3A6NE82 208 aaPredicted RBP4.82□□□□□ -1.64
CTNNA1-232ENST00000522013 TLCD2A6NGC4 264 aa4.82□□□□□ -1.64
CTNNA1-232ENST00000522013 LRRC53A6NM62 1247 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms