RNA–Protein interactions for RNA: ENST00000522006.5

LAMA4-219, Transcript of laminin subunit alpha 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LAMA4, Length 6,438 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-219ENST00000522006 PYCR2Q96C36 320 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PKP4Q99569 1192 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 MIPEPQ99797 713 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 NKX1-2Q9UD57 310 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ZDHHC2Q9UIJ5 367 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PPM1HQ9ULR3 514 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PCDHGB5Q9Y5G0 923 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 CXorf49A8MYA2 514 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 H3BSA7 217 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SIX3O95343 332 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 FESP07332 822 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 C8BP07358 591 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 LRRC32Q14392 662 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SIRPB2Q5JXA9 342 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ARL9Q6T311 187 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PRR23BQ6ZRT6 265 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 HFE2Q6ZVN8 426 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 KLHL6Q8WZ60 621 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 TRIM43Q96BQ3 446 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 OR52B2Q96RD2 323 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ZDHHC18Q9NUE0 388 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 TMEM233B4DJY2 109 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ATP6V1G1O75348 118 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 KLK1P06870 262 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 H1F0P07305 194 aaKnown RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 RPL17P18621 184 aaKnown RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 GSTM3P21266 225 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 HSD17B2P37059 387 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SMSP52788 366 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ANKRD23Q86SG2 305 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 RGMAQ96B86 450 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 PRICKLE1Q96MT3 831 aaPredicted RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 HAPLN3Q96S86 360 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 TTYH2Q9BSA4 534 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 YTHDF1Q9BYJ9 559 aaKnown RBP11.12□□□□□ -0.63
LAMA4-219ENST00000522006 ZDHHC4Q9NPG8 344 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 SIRPGQ9P1W8 387 aa11.12□□□□□ -0.63
LAMA4-219ENST00000522006 CCRL2O00421 344 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 PEPDP12955 493 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 DNASE1L3Q13609 305 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 PDCD4Q53EL6 469 aaKnown RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 LRRC70Q7Z2Q7 622 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 SLC37A3Q8NCC5 494 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 C2orf15Q8WU43 125 aaKnown RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 RFT1Q96AA3 541 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 PKP2Q99959 881 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ZCCHC3Q9NUD5 404 aaKnown RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ZIM2Q9NZV7 527 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 PPLO60437 1756 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF726A6NNF4 738 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 J3QLW9 94 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 HAS3O00219 553 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 KAT7O95251 611 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ALPIP09923 528 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF19P17023 458 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 STOMP27105 288 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 WDR4P57081 412 aaKnown RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 RAB15P59190 212 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 COL9A3Q14050 684 aaPredicted RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 OR2T5Q6IEZ7 315 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 OR2T29Q8NH02 315 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 DGAT2Q96PD7 388 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 SCGB3A2Q96PL1 93 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 CGREF1Q99674 301 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ARHGEF28Q8N1W1 1705 aaKnown RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 TRBC2A0A5B9 178 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 NDUFS4O43181 175 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 TBX10O75333 385 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 CDRT1O95170 752 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 IFNA21P01568 189 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 NUDT6P53370 316 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 NRG3P56975 720 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 GXYLT1Q4G148 440 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 FBXO43Q4G163 708 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 SCAMP5Q8TAC9 235 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 IRF2BPLQ9H1B7 796 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 CENPMQ9NSP4 180 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 CACNG4Q9UBN1 327 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 AJAP1Q9UKB5 411 aaPredicted RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ILVBLA1L0T0 632 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF670-ZNF695F2Z2N8 137 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 SRPRAP08240 638 aaKnown RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 LHCGRP22888 699 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 RPL26P61254 145 aaKnown RBP11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ZNF227Q86WZ6 799 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 CPNE8Q86YQ8 564 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 THAP6Q8TBB0 222 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 UCK2Q9BZX2 261 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 MCCC2Q9HCC0 563 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ANKHQ9HCJ1 492 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ZDHHC3Q9NYG2 299 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 PCDHGA12O60330 932 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 SMPD1P17405 629 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 DGKQP52824 942 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 ENPP2Q13822 863 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 DCAF12L1Q5VU92 463 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 PTF1AQ7RTS3 328 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 SNX29P2Q8IUI4 249 aa11.11□□□□□ -0.63
LAMA4-219ENST00000522006 AQP11Q8NBQ7 271 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms