RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 FAM45AQ8TCE6 357 aa17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 CCDC138Q96M89 665 aa17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 ZFYVE21Q9BQ24 234 aa17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 SYNPO2LQ9H987 977 aa17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 STOX2Q9P2F5 926 aaPredicted RBP17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 ANKMY1Q9P2S6 941 aa17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 PTRH2Q9Y3E5 179 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 HELZ2Q9BYK8 2649 aaKnown RBP17.1■□□□□ 0.33
TRAPPC9-211ENST00000521700 HYKKA2RU49 373 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 H0YGG7 62 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 CCNDBP1O95273 360 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 MED26O95402 600 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 EIF2S1P05198 315 aaKnown RBP17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 CD63P08962 238 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 NR1D1P20393 614 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 IL2P60568 153 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 ARF3P61204 181 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 SSPNQ14714 243 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 TRADDQ15628 312 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 PHKG1Q16816 387 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 LACTB2Q53H82 288 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 MBOAT1Q6ZNC8 495 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 ZNF572Q7Z3I7 529 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 ZC3HC1Q86WB0 502 aaKnown RBP17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 PALM2Q8IXS6 379 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 DTWD1Q8N5C7 304 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 PYROXD1Q8WU10 500 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 ING2Q9H160 280 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 SAYSD1Q9NPB0 183 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 SMYD2Q9NRG4 433 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 CUEDC1Q9NWM3 386 aaPredicted RBP17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 TP53TG5Q9Y2B4 290 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 PCSK5Q92824 1860 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 ANKRD12Q6UB98 2062 aa17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 GCN1Q92616 2671 aaKnown RBP17.09■□□□□ 0.33
TRAPPC9-211ENST00000521700 J3QKU1 62 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 EIF3HO15372 352 aaKnown RBP eCLIP17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 SSTR1P30872 391 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 OTX2P32243 289 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 FOLR3P41439 243 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 CCL11P51671 97 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 RELAQ04206 551 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 SP140Q13342 867 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 PRTGQ2VWP7 1150 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 THEMIS2Q5TEJ8 643 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 TCTN3Q6NUS6 607 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 AGTRAPQ6RW13 159 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 TMEM207Q6UWW9 146 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 CAPN12Q6ZSI9 719 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 COX15Q7KZN9 410 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 OVCH1Q7RTY7 1134 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 SLC26A11Q86WA9 606 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 RAB43Q86YS6 212 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 METTL27Q8N6F8 245 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 OR2Y1Q8NGV0 311 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 PTERQ96BW5 349 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 OR2A5Q96R48 311 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 CCDC177Q9NQR7 707 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 ACSS2Q9NR19 701 aa17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 UTP6Q9NYH9 597 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 UTP11Q9Y3A2 253 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 MDC1Q14676 2089 aaKnown RBP17.08■□□□□ 0.32
TRAPPC9-211ENST00000521700 H7BY64 318 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 PIAS1O75925 651 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 ALBP02768 609 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 UMODP07911 640 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 HIST1H2AGP0C0S8 130 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 PIM1P11309 404 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 HIST1H2ADP20671 130 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 SAT1P21673 171 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 OR1D4P47884 311 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 PLTPP55058 493 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 TBPL1P62380 186 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 ATP1A4Q13733 1029 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 ZXDCQ2QGD7 858 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 ATG14Q6ZNE5 492 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 FKBP10Q96AY3 582 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 PDLIM5Q96HC4 596 aaKnown RBP17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 HIST1H2AHQ96KK5 128 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 C16orf45Q96MC5 204 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 PRAP1Q96NZ9 151 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 HIST1H2AJQ99878 128 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 MCMBPQ9BTE3 642 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 H2AFJQ9BTM1 129 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 ATG10Q9H0Y0 220 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 CDC23Q9UJX2 597 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 IKZF3Q9UKT9 509 aa17.07■□□□□ 0.32
TRAPPC9-211ENST00000521700 FAM95CA0A1B0GW59 222 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 CXorf49A8MYA2 514 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 PYCARD-AS1I3L0S3 204 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 PDGFAP04085 211 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 TAS2R39P59534 338 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 NAE1Q13564 534 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 NKG7Q16617 165 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 PRAMEF13Q5VWM6 474 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 MED25Q71SY5 747 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 ADCK2Q7Z695 626 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 PLD3Q8IV08 490 aa17.06■□□□□ 0.32
TRAPPC9-211ENST00000521700 CSNK1A1LQ8N752 337 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms