RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 H0YGG7 62 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 PEX12O00623 359 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 SEC31AO94979 1220 aaKnown RBP16.29■□□□□ 0.2
SQLE-205ENST00000521232 MED26O95402 600 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 SYF2O95926 243 aaKnown RBP16.29■□□□□ 0.2
SQLE-205ENST00000521232 IGHEP01854 428 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 ATXN8OSP0DMR3 200 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 RGS4P49798 205 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 ITGA8P53708 1063 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 EMP3P54852 163 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 FOXL2P58012 376 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 ARF3P61204 181 aaPredicted RBP16.29■□□□□ 0.2
SQLE-205ENST00000521232 FOXK1P85037 733 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 CBLBQ13191 982 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 FRG1Q14331 258 aaKnown RBP16.29■□□□□ 0.2
SQLE-205ENST00000521232 NKG7Q16617 165 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 PRTGQ2VWP7 1150 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 STEAP4Q687X5 459 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 PAQR3Q6TCH7 311 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 PPP1R32Q7Z5V6 425 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 TMEM151BQ8IW70 566 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.29■□□□□ 0.2
SQLE-205ENST00000521232 SNF8Q96H20 258 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 WDR83Q9BRX9 315 aaKnown RBP16.29■□□□□ 0.2
SQLE-205ENST00000521232 TRIM51Q9BSJ1 452 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 P4HTMQ9NXG6 502 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 UTP6Q9NYH9 597 aaKnown RBP16.29■□□□□ 0.2
SQLE-205ENST00000521232 ZNF451Q9Y4E5 1061 aa16.29■□□□□ 0.2
SQLE-205ENST00000521232 A6NL46 340 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 VSTM2BA6NLU5 285 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 EIF2S1P05198 315 aaKnown RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 C8GP07360 202 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 IMPA1P29218 277 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 OR1D4P47884 311 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 CDKN2DP55273 166 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 ARL4CP56559 192 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 TSTA3Q13630 321 aaPredicted RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 HIF1AQ16665 826 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 COLEC12Q5KU26 742 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 DCAF10Q5QP82 559 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 HP1BP3Q5SSJ5 553 aaPredicted RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 RBM20Q5T481 1227 aaKnown RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 PRMT9Q6P2P2 845 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 TRMT10BQ6PF06 316 aaKnown RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 HPS6Q86YV9 775 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 MCOLN3Q8TDD5 553 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 CCDC138Q96M89 665 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 OR2A5Q96R48 311 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 SPSB2Q99619 263 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 SMAD5Q99717 465 aaKnown RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 NUDT9Q9BW91 350 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 SYNPO2LQ9H987 977 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 ZNF304Q9HCX3 659 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 PPANQ9NQ55 473 aaKnown RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 GPR83Q9NYM4 423 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 ADAMTS6Q9UKP5 1117 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 G3BP2Q9UN86 482 aaKnown RBP16.28■□□□□ 0.2
SQLE-205ENST00000521232 CHMP2BQ9UQN3 213 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 PDE10AQ9Y233 779 aa16.28■□□□□ 0.2
SQLE-205ENST00000521232 EFCAB8A8MWE9 144 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 SLC16A5O15375 505 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 EZRP15311 586 aaKnown RBP16.27■□□□□ 0.2
SQLE-205ENST00000521232 MMP11P24347 488 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 SOX8P57073 446 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 IGFBP7Q16270 282 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 MUM1Q2TAK8 710 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 DTWD1Q8N5C7 304 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 CFAP36Q96G28 342 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 C10orf90Q96M02 699 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 KRT12Q99456 494 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 PARVBQ9HBI1 364 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 STOX2Q9P2F5 926 aaPredicted RBP16.27■□□□□ 0.2
SQLE-205ENST00000521232 SLC17A6Q9P2U8 582 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 NXT1Q9UKK6 140 aaKnown RBP16.27■□□□□ 0.2
SQLE-205ENST00000521232 CORO1CQ9ULV4 474 aaPredicted RBP16.27■□□□□ 0.2
SQLE-205ENST00000521232 VWA7Q9Y334 891 aa16.27■□□□□ 0.2
SQLE-205ENST00000521232 DOCK10Q96BY6 2186 aa16.27■□□□□ 0.19
SQLE-205ENST00000521232 E7ESA3 106 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 AGPSO00116 658 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 TSPAN12O95859 305 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 HRH2P25021 359 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 SP140Q13342 867 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 THEMIS2Q5TEJ8 643 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 HECTD2Q5U5R9 776 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 GARNL3Q5VVW2 1013 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 PALM2Q8IXS6 379 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 MYO1HQ8N1T3 1032 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 GALNT16Q8N428 558 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 METTL27Q8N6F8 245 aaPredicted RBP16.26■□□□□ 0.19
SQLE-205ENST00000521232 CLEC1AQ8NC01 280 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 COL26A1Q96A83 441 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 MVB12AQ96EY5 273 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 TRIM31Q9BZY9 425 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 PCBD2Q9H0N5 130 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 ATP13A2Q9NQ11 1180 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 MOCS1Q9NZB8 636 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 C5AR2Q9P296 337 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 CTSFQ9UBX1 484 aa16.26■□□□□ 0.19
SQLE-205ENST00000521232 RUVBL1Q9Y265 456 aaKnown RBP16.26■□□□□ 0.19
SQLE-205ENST00000521232 SNX24Q9Y343 169 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms