RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 BADQ92934 168 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 ARHGEF26Q96DR7 871 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 TWNKQ96RR1 684 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 PYGO2Q9BRQ0 406 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 DPEP3Q9H4B8 488 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 FAM124BQ9H5Z6 455 aaPredicted RBP3.92□□□□□ -1.78
CLK4-207ENST00000520909 ENTPD7Q9NQZ7 604 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 FAM49BQ9NUQ9 324 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 TBC1D13Q9NVG8 400 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 DNAJB4Q9UDY4 337 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 CHORDC1Q9UHD1 332 aaPredicted RBP3.92□□□□□ -1.78
CLK4-207ENST00000520909 KIAA1257Q9ULG3 409 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 NENFQ9UMX5 172 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 CDC14AQ9UNH5 594 aa3.92□□□□□ -1.78
CLK4-207ENST00000520909 TET1Q8NFU7 2136 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 CITO14578 2027 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 TRIP11Q15643 1979 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 ARHGEF37A1IGU5 675 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 TYW5A2RUC4 315 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 CTAGE9A4FU28 777 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 TMEM110-MUSTN1A8MSY1 372 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 M0QYV0 167 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 O00370 1275 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 TRAPPC3O43617 180 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 ATP2C2O75185 946 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 NDUFS7O75251 213 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 BAIAP3O94812 1187 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 MOCS3O95396 460 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 LSM8O95777 96 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 TUBBP07437 444 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 GALTP07902 379 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 CCDC130P13994 396 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 ACAT1P24752 427 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 ADORA2BP29275 332 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 PBX3P40426 434 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 SLC11A1P49279 550 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 AARSP49588 968 aaKnown RBP eCLIP3.91□□□□□ -1.78
CLK4-207ENST00000520909 TUBB4BP68371 445 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 DEFB103AP81534 67 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 RELQ04864 619 aaPredicted RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 GALNT1Q10472 559 aaPredicted RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 PFKFB4Q16877 469 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 MDH1BQ5I0G3 518 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 ZC2HC1BQ5TFG8 222 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 PPP1R2P3Q6NXS1 205 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 LCLAT1Q6UWP7 414 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 CD300LGQ6UXG3 332 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 MMS22LQ6ZRQ5 1243 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 SYT13Q7L8C5 426 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 TMCO2Q7Z6W1 182 aaPredicted RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 ERICH1Q86X53 443 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 CEP57Q86XR8 500 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 MCOLN2Q8IZK6 566 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 CRYBG2Q8N1P7 616 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 THEM5Q8N1Q8 247 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 TMEM86AQ8N2M4 240 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 LRRC43Q8N309 656 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 SLC35F6Q8N357 371 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 WDTC1Q8N5D0 677 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 RNF10Q8N5U6 811 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 C1orf131Q8NDD1 294 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 DNAAF1Q8NEP3 725 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 KIF18AQ8NI77 898 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 RFFLQ8WZ73 363 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 SECISBP2LQ93073 1101 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 TOP1MTQ969P6 601 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 ZNF653Q96CK0 615 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 LBHD1Q9BQE6 289 aaPredicted RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 SYT15Q9BQS2 421 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 C11orf70Q9BRQ4 267 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 MED10Q9BTT4 135 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 MRPL9Q9BYD2 267 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 THAP2Q9H0W7 228 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 LHX5Q9H2C1 402 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 SYNCQ9H7C4 482 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 ARFGAP3Q9NP61 516 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 KLHL1Q9NR64 748 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 FAM118AQ9NWS6 357 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 ADAM22Q9P0K1 906 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 CNOT8Q9UFF9 292 aaKnown RBP3.91□□□□□ -1.78
CLK4-207ENST00000520909 NME7Q9Y5B8 376 aa3.91□□□□□ -1.78
CLK4-207ENST00000520909 SCN1AP35498 2009 aa3.9□□□□□ -1.78
CLK4-207ENST00000520909 ANK1P16157 1881 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 SF3B1O75533 1304 aaKnown RBP eCLIP3.9□□□□□ -1.791e-14■■■■■ 94.8
CLK4-207ENST00000520909 MYBPHLA2RUH7 354 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 BTNL10A8MVZ5 291 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 GOLGA8SH3BPF8 625 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 TMEM189-UBE2V1I3L0A0 370 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 CLDN5O00501 218 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 SOCS6O14544 535 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 PALMO75781 387 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 MTA2O94776 668 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 NDUFB4O95168 129 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 FTCDO95954 541 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 CALB1P05937 261 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 FAM200BP0CF97 657 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 MYBL1P10243 752 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 TYMPP19971 482 aa3.9□□□□□ -1.79
CLK4-207ENST00000520909 ZNF10P21506 573 aaPredicted RBP3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms