RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 GAS8O95995 478 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 CCDC175P0C221 793 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 ZSCAN5DPP0CG00 497 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 GP1BBP13224 206 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 GNLYP22749 145 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 PKLRP30613 574 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 RPL22P35268 128 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 CCNFP41002 786 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 UQCRFS1P47985 274 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 RAB28P51157 221 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 CSE1LP55060 971 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 DCDP81605 110 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 SLC7A5Q01650 507 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 GRB7Q14451 532 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 SIX1Q15475 284 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 DEFB110Q30KQ9 67 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 SYTL3Q4VX76 610 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 C1orf189Q5VU69 101 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 MLIPQ5VWP3 458 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 MRM1Q6IN84 353 aaKnown RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 TLDC1Q6P9B6 456 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 NLRP9Q7RTR0 991 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 MRGPREQ86SM8 312 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 RAB43Q86YS6 212 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 HPS6Q86YV9 775 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 TMEM151BQ8IW70 566 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 FAM20CQ8IXL6 584 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 LILRB2Q8N423 598 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 ZNF655Q8N720 491 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 Q8NA96 180 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 LINC01555Q8NAE3 123 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 PROKR1Q8TCW9 393 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 WFDC12Q8WWY7 111 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 N4BP2L2Q92802 583 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 DHRS1Q96LJ7 313 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 SLC22A11Q9NSA0 550 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 MARCH4Q9P2E8 410 aaPredicted RBP8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 PLCL2Q9UPR0 1127 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 ZNF148Q9UQR1 794 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 PADI2Q9Y2J8 665 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 PPP2R2CQ9Y2T4 447 aa8.91□□□□□ -0.98
CTNNA1-221ENST00000520339 SPTBP11277 2137 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 BLACEA4D250 179 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 USP27XA6NNY8 438 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 E7EVH7 732 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 KIF2AO00139 706 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PRMT5O14744 637 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PRICKLE3O43900 615 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 KDM1AO60341 852 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 DPM1O60762 260 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 VPS4BO75351 444 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 UBOX5O94941 541 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 ONECUT2O95948 504 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 CD63P08962 238 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 CD9P21926 228 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 COL8A1P27658 744 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 AOAHP28039 575 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 NOS3P29474 1203 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 OTX2P32243 289 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PPARGP37231 505 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 RRADP55042 308 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PRAMEP78395 509 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 HSPA14Q0VDF9 509 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 SNX1Q13596 522 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 INPP5JQ15735 1006 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 NKAIN1Q4KMZ8 207 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 FASTKD1Q53R41 847 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PCID2Q5JVF3 399 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 SEL1L2Q5TEA6 688 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 VWA5B1Q5TIE3 1220 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 CDPF1Q6NVV7 123 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 JMJD6Q6NYC1 403 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PPP1R32Q7Z5V6 425 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 LDB1Q86U70 411 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 KRT222Q8N1A0 295 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 LMNTD1Q8N9Z9 388 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 OR2Y1Q8NGV0 311 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 FBLIM1Q8WUP2 373 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 ASZ1Q8WWH4 475 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 FER1L6-AS2Q96M78 137 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 C16orf45Q96MC5 204 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 IP6K3Q96PC2 410 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 IL17FQ96PD4 163 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 CHRAC1Q9NRG0 131 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 TREX1Q9NSU2 369 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 TRMT1Q9NXH9 659 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 EURLQ9NYK6 297 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 GPR83Q9NYM4 423 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PAK5Q9P286 719 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 C5AR2Q9P296 337 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 IFT80Q9P2H3 777 aaPredicted RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 DHCR7Q9UBM7 475 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PFDN2Q9UHV9 154 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 VPS4AQ9UN37 437 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 G3BP2Q9UN86 482 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 SRPK3Q9UPE1 567 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 KLHL20Q9Y2M5 609 aa8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 PTRH2Q9Y3E5 179 aaKnown RBP8.9□□□□□ -0.98
CTNNA1-221ENST00000520339 USP9YO00507 2555 aaPredicted RBP8.9□□□□□ -0.99
CTNNA1-221ENST00000520339 NOTCH2Q04721 2471 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms