RNA–Protein interactions for RNA: ENST00000519482.1

TRAPPC9-206, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-206ENST00000519482 DEFB110Q30KQ9 67 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 FAM69BQ5VUD6 431 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 MLIPQ5VWP3 458 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 TTC23LQ6PF05 361 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 CPLX4Q7Z7G2 160 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 TRABD2AQ86V40 505 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 LRRC6Q86X45 466 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 VRK3Q8IV63 474 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 FAM26EQ8N5C1 309 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 EFCAB3Q8N7B9 438 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 FDCSPQ8NFU4 85 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 OR2L8Q8NGY9 312 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 LKAAEAR1Q8TD35 194 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 DENND1AQ8TEH3 1009 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 CHMP6Q96FZ7 201 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 SIGLEC10Q96LC7 697 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 SMC6Q96SB8 1091 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 P2RY12Q9H244 342 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 PPANQ9NQ55 473 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 TREX1Q9NSU2 369 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 INTS7Q9NVH2 962 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 BFARQ9NZS9 450 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 ANKMY1Q9P2S6 941 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 ZC3H7BQ9UGR2 993 aaKnown RBP11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 ZNF180Q9UJW8 692 aa11.97□□□□□ -0.49
TRAPPC9-206ENST00000519482 TMEM120BA0PK00 339 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 IQCF5A8MTL0 148 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 KLHL41O60662 606 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 VPS4BO75351 444 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 SORBS2O94875 1100 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 FKBP9O95302 570 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 KRT15P19012 456 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 MAGP20916 626 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 RPS3P23396 243 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 CNTFP26441 200 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 GCAP28676 217 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 FOLR3P41439 243 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 ARSFP54793 590 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 SESN2P58004 480 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 SRSF1Q07955 248 aaKnown RBP eCLIP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 NAB1Q13506 487 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 ATP1A4Q13733 1029 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 FRG1Q14331 258 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 NADK2Q4G0N4 442 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 NKAIN1Q4KMZ8 207 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 UBAP2Q5T6F2 1119 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 C1orf189Q5VU69 101 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 TTC19Q6DKK2 380 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 PTRHD1Q6GMV3 140 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 MRPL14Q6P1L8 145 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 LDB1Q86U70 411 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 SLC26A11Q86WA9 606 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 CYP4X1Q8N118 509 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 ZNF655Q8N720 491 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 LINC01555Q8NAE3 123 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 GALNT11Q8NCW6 608 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 CFAP61Q8NHU2 1237 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 GSDMBQ8TAX9 411 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 CPT1CQ8TCG5 803 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 SLC44A1Q8WWI5 657 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 DLG3Q92796 817 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 RAD51AP1Q96B01 352 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 MTBPQ96DY7 904 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 FER1L6-AS2Q96M78 137 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 NDC1Q9BTX1 674 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 NUDT9Q9BW91 350 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 RAB11FIP5Q9BXF6 653 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 MRM3Q9HC36 420 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 IRAK4Q9NWZ3 460 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 GPR83Q9NYM4 423 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 C5AR2Q9P296 337 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 MARCH4Q9P2E8 410 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 IFT80Q9P2H3 777 aaPredicted RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 DHCR7Q9UBM7 475 aaKnown RBP11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 NDOR1Q9UHB4 597 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 GNPTGQ9UJJ9 305 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 SLC39A10Q9ULF5 831 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 VPS4AQ9UN37 437 aa11.96□□□□□ -0.49
TRAPPC9-206ENST00000519482 CYSRT1A8MQ03 144 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 NDUFS3O75489 264 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 CTSBP07858 339 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 INHBAP08476 426 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 OTX2P32243 289 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 GCGRP47871 477 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 SERPINB9P50453 376 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 ZC3H12BQ5HYM0 836 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 HP1BP3Q5SSJ5 553 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 YOD1Q5VVQ6 348 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 JMJD6Q6NYC1 403 aaPredicted RBP11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 MRGPREQ86SM8 312 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 SRRM1Q8IYB3 904 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 RAB42Q8N4Z0 105 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 OR2Y1Q8NGV0 311 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 ZNF473Q8WTR7 871 aaKnown RBP11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 DYDC1Q8WWB3 177 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 CKAP2Q8WWK9 683 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 ZUFSPQ96AP4 578 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 NACC2Q96BF6 587 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 PTERQ96BW5 349 aa11.95□□□□□ -0.5
TRAPPC9-206ENST00000519482 ZNF317Q96PQ6 595 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms