RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 RPS15P62841 145 aaKnown RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 NAE1Q13564 534 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 NCF4Q15080 339 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 KBTBD12Q3ZCT8 623 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 CRTC2Q53ET0 693 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 MLIPQ5VWP3 458 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 AGTRAPQ6RW13 159 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 SBSNQ6UWP8 590 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 TTLL10Q6ZVT0 673 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 COX15Q7KZN9 410 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 MMGT1Q8N4V1 131 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 LRRN4CLQ8ND94 238 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 GABPB2Q8TAK5 448 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 MCOLN3Q8TDD5 553 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 FBF1Q8TES7 1133 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 PYCR2Q96C36 320 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 GPR87Q9BY21 358 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 NLNQ9BYT8 704 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 UTP6Q9NYH9 597 aaKnown RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 CORO1CQ9ULV4 474 aaPredicted RBP12.73□□□□□ -0.37
VEGFA-219ENST00000518824 AP1M2Q9Y6Q5 423 aa12.73□□□□□ -0.37
VEGFA-219ENST00000518824 FITM1A5D6W6 292 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 H7BY64 318 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 NDC80O14777 642 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 SLC16A5O15375 505 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 KALRNO60229 2985 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 HBQ1P09105 142 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 HSD17B2P37059 387 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 CCR10P46092 362 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 DCDP81605 110 aaKnown RBP12.72□□□□□ -0.37
VEGFA-219ENST00000518824 MC1RQ01726 317 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 NFATC3Q12968 1075 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 PPP1R3AQ16821 1122 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 UGT8Q16880 541 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 HKDC1Q2TB90 917 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 C18orf21Q32NC0 220 aaPredicted RBP12.72□□□□□ -0.37
VEGFA-219ENST00000518824 NKAIN1Q4KMZ8 207 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 ZC3H12BQ5HYM0 836 aaKnown RBP12.72□□□□□ -0.37
VEGFA-219ENST00000518824 THEMIS2Q5TEJ8 643 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 PRAMEF13Q5VWM6 474 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 SYVN1Q86TM6 617 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 C10orf90Q96M02 699 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 CCDC138Q96M89 665 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 PRAP1Q96NZ9 151 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 CATSPER2Q96P56 530 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 OR2A5Q96R48 311 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 OR4K3Q96R72 315 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 RBBP8Q99708 897 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 ZFYVE21Q9BQ24 234 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 MACROD1Q9BQ69 325 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 MESP1Q9BRJ9 268 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 NDC1Q9BTX1 674 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 CUTCQ9NTM9 273 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 TXLNGQ9NUQ3 528 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 GEMIN8Q9NWZ8 242 aaKnown RBP12.72□□□□□ -0.37
VEGFA-219ENST00000518824 NDOR1Q9UHB4 597 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 SNX7Q9UNH6 387 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 POLHQ9Y253 713 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 MRPS2Q9Y399 296 aaKnown RBP12.72□□□□□ -0.37
VEGFA-219ENST00000518824 MAU2Q9Y6X3 613 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 CFAP46Q8IYW2 2715 aa12.72□□□□□ -0.37
VEGFA-219ENST00000518824 BSNQ9UPA5 3926 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 COL6A6A6NMZ7 2263 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 HYKKA2RU49 373 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 PYCARD-AS1I3L0S3 204 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 FFAR3O14843 346 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 DSCR3O14972 297 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 GPR42O15529 346 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 AGXTP21549 392 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 ECHS1P30084 290 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 CAV1Q03135 178 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 KCNAB2Q13303 367 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 SP140Q13342 867 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 PRTGQ2VWP7 1150 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 LRRC8EQ6NSJ5 796 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 MRPL14Q6P1L8 145 aaKnown RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 ADCK2Q7Z695 626 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 CTAGE3PQ8IX95 158 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 ARHGEF39Q8N4T4 335 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 PPM1NQ8N819 430 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 PROKR1Q8TCW9 393 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 APOBEC4Q8WW27 367 aaKnown RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 MRRFQ96E11 262 aaKnown RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 PDLIM5Q96HC4 596 aaKnown RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 SGPP1Q9BX95 441 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 CCDC177Q9NQR7 707 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 ZNF71Q9NQZ8 489 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 ENAMQ9NRM1 1142 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 ARL15Q9NXU5 204 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 IFT80Q9P2H3 777 aaPredicted RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 SRPK3Q9UPE1 567 aa12.71□□□□□ -0.37
VEGFA-219ENST00000518824 RUVBL1Q9Y265 456 aaKnown RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 PTRH2Q9Y3E5 179 aaKnown RBP12.71□□□□□ -0.37
VEGFA-219ENST00000518824 A0A1B0GX78 115 aa12.7□□□□□ -0.38
VEGFA-219ENST00000518824 FEZF1A0PJY2 475 aa12.7□□□□□ -0.38
VEGFA-219ENST00000518824 CTAGE15A4D2H0 777 aa12.7□□□□□ -0.38
VEGFA-219ENST00000518824 ARGFXA6NJG6 315 aa12.7□□□□□ -0.38
VEGFA-219ENST00000518824 ZNF839A8K0R7 811 aa12.7□□□□□ -0.38
VEGFA-219ENST00000518824 LCMT2O60294 686 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms