RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 OTOGLQ3ZCN5 2332 aa5.25□□□□□ -1.57
SCARNA16.4-201ENST00000516956 EP300Q09472 2414 aaPredicted RBP5.25□□□□□ -1.57
SCARNA16.4-201ENST00000516956 COL5A1P20908 1838 aaPredicted RBP5.25□□□□□ -1.57
SCARNA16.4-201ENST00000516956 WDR87Q6ZQQ6 2873 aa5.25□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZNF292O60281 2723 aa5.25□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MN1Q10571 1320 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MUC3AQ02505 3323 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 A0A088AWK7 358 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 IGHV5-51A0A0C4DH38 117 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 A0A0J9YVX5 310 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMEM120BA0PK00 339 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FAM149AA5PLN7 773 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KRT87PA6NCN2 255 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 A8MT66 165 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMEM150CB9EJG8 249 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 E7EQ34 232 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PLD2O14939 933 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 BIRC5O15392 142 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PRPF4O43172 522 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 OR1F1O43749 312 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 DLX3O60479 287 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SRPX2O60687 465 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 OR2B3O76000 313 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 WISP3O95389 354 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HSPA4LO95757 839 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KRT6AP02538 564 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PROCP04070 461 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KRT6BP04259 564 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KLK3P07288 261 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ANKRD34CP0C6C1 535 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SLC35G6P0C7Q6 338 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CCNYL3P0C7X3 344 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 THRAP10827 490 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ERGP11308 486 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PIM1P11309 404 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HOXB3P14651 431 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PVRP15151 417 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 EZRP15311 586 aaKnown RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ST6GAL1P15907 406 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NPPBP16860 134 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 IMPDH1P20839 514 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZNF10P21506 573 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GRK2P25098 689 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PSMB5P28074 263 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HMOX2P30519 316 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HOXD11P31277 338 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CSF2RBP32927 897 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GGT5P36269 586 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HNF4AP41235 474 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GRIA3P42263 894 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GDF5P43026 501 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SLC6A12P48065 614 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KCNC1P48547 511 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KRT6CP48668 564 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NAGLUP54802 743 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PKNOX1P55347 436 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ITGA1P56199 1179 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 VSX2P58304 361 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 HERVK_113P63132 956 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PPP2R2AP63151 447 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GABREP78334 506 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ZFP36L1Q07352 338 aaKnown RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 RGS1Q08116 209 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TGM3Q08188 693 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CHIT1Q13231 466 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SLBPQ14493 270 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 IL11RAQ14626 422 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PCBP2Q15366 365 aaKnown RBP eCLIP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FAM214AQ32MH5 1076 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FBXO48Q5FWF7 155 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CDCP2Q5VXM1 449 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 LIPMQ5VYY2 423 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NXPE4Q6UWF7 544 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMIGD1Q6UXZ0 262 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMPRSS7Q7RTY8 843 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GOLGA7Q7Z5G4 137 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ARHGAP22Q7Z5H3 698 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 PPP1R3BQ86XI6 285 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TMEM126BQ8IUX1 230 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 MCATQ8IVS2 390 aaKnown RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 C10orf107Q8IVU9 208 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 SPNS2Q8IVW8 549 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KIRREL3Q8IZU9 778 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CACTIN-AS1Q8N1I8 211 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 DCBLD1Q8N8Z6 715 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CAMKVQ8NCB2 501 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TRPV3Q8NET8 790 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 OR2A1Q8NGT9 310 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 METTL6Q8TCB7 284 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 TRPC4APQ8TEL6 797 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 UBTD2Q8WUN7 234 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 KLHL6Q8WZ60 621 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 ESAMQ96AP7 390 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 NXPE2Q96DL1 559 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CLIP3Q96DZ5 547 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 THAP11Q96EK4 314 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 LIN37Q96GY3 246 aaPredicted RBP5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 FAR2Q96K12 515 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 CNDP1Q96KN2 507 aa5.24□□□□□ -1.57
SCARNA16.4-201ENST00000516956 GPR78Q96P69 363 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms