RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 PTP4A3O75365 173 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 IGHV2-70P01814 119 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 TRIM21P19474 475 aaKnown RBP2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 DNASE1P24855 282 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 OR3A2P47893 321 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 CLCN4P51793 760 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 STAT2P52630 851 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 MAPK12P53778 367 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 MC1RQ01726 317 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 TRIM29Q14134 588 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 EXT1Q16394 746 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 SNAPC1Q16533 368 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 RNF212Q495C1 297 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 MCMDC2Q4G0Z9 681 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 OLFML2AQ68BL7 652 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 FCRLAQ7L513 359 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 RNF130Q86XS8 419 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 RPAP2Q8IXW5 612 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 MMD2Q8IY49 270 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 NOA1Q8NC60 698 aaKnown RBP2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 APPL2Q8NEU8 664 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 OR4D10Q8NGI6 311 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 OR10G7Q8NGN6 311 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 RHOXF1Q8NHV9 184 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 METTL21AQ8WXB1 218 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 ATL1Q8WXF7 558 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 PIGBQ92521 554 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 MPP4Q96JB8 637 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 CNOT6LQ96LI5 555 aaKnown RBP2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 C1orf147Q96MC9 270 aaPredicted RBP2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 MAP3K3Q99759 626 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 TEX12Q9BXU0 123 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 PARLQ9H300 379 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 CLIP2Q9UDT6 1046 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 BAIAP2L1Q9UHR4 511 aa2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 PTRH2Q9Y3E5 179 aaKnown RBP2.22□□□□□ -2.05
RNU6-1088P-201ENST00000516850 IQCMA0A1B0GVH7 501 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TSPAN9O75954 239 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GP1BBP13224 206 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PFKFB1P16118 471 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 AOC1P19801 751 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TNFAIP3P21580 790 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CETN2P41208 172 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NAP1L1P55209 391 aaKnown RBP2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CDH13P55290 713 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 KRTAP10-8P60410 259 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TRAP1Q12931 704 aaKnown RBP2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 VEZF1Q14119 521 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FHL5Q5TD97 284 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 GARNL3Q5VVW2 1013 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RSBN1Q5VWQ0 802 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FAM166AQ6J272 317 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NUP54Q7Z3B4 507 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CATSPER3Q86XQ3 398 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PHC2Q8IXK0 858 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TAGAPQ8N103 731 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SLC34A3Q8N130 599 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CHURC1Q8WUH1 139 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 JAKMIP2Q96AA8 810 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FAM120BQ96EK7 910 aaKnown RBP2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ZHX3Q9H4I2 956 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SLC35C2Q9NQQ7 365 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PRDM4Q9UKN5 801 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TSPAN16Q9UKR8 245 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ABT1Q9ULW3 272 aaKnown RBP2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 VSIG4Q9Y279 399 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 WBP11Q9Y2W2 641 aaKnown RBP2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 KLF2Q9Y5W3 355 aaPredicted RBP2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 STYXL1Q9Y6J8 313 aa2.21□□□□□ -2.06
RNU6-1088P-201ENST00000516850 IGLV4-3A0A075B6K6 122 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 LOC102723996A0A087X1L8 192 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TRBV4-1A0A0J9YWV2 114 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CCDC189A1A4V9 331 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 K7EQD1 137 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SLC1A7O00341 560 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TRAFD1O14545 582 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ADAMDEC1O15204 470 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SURF4O15260 269 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 SNAP91O60641 907 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 DANCRP0C864 163 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 AADACP22760 399 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 ETV5P41161 510 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 UBXN2AP68543 259 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 CREB5Q02930 508 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NTRK2Q16620 822 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 DUSP28Q4G0W2 176 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 FGD3Q5JSP0 725 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 OR4A47Q6IF82 309 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 BAIAP2L2Q6UXY1 529 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 C3P1Q6ZMU1 363 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 C4orf50Q6ZRC1 276 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TIPARPQ7Z3E1 657 aaKnown RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 MAATS1Q7Z4T9 603 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RYBPQ8N488 228 aaPredicted RBP2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TTC30BQ8N4P2 665 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 OR52B6Q8NGF0 335 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 TYMSOSQ8TAI1 123 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 RFT1Q96AA3 541 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 PTERQ96BW5 349 aa2.2□□□□□ -2.06
RNU6-1088P-201ENST00000516850 NXNL1Q96CM4 212 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms