RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CATSPEREQ5SY80 951 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CACHD1Q5VU97 1274 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 IL23RQ5VWK5 629 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PAOXQ6QHF9 649 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TAF8Q7Z7C8 310 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NRROSQ86YC3 692 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TRIM48Q8IWZ4 208 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PARP9Q8IXQ6 854 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LAS2Q8IYD9 372 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TMEFF1Q8IYR6 380 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FAM9CQ8IZT9 166 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KRT78Q8N1N4 520 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LINC01555Q8NAE3 123 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KYQ8NBH2 561 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR7G3Q8NG95 312 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR9I1Q8NGQ6 314 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FBXO27Q8NI29 283 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 WDR20Q8TBZ3 569 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RCN3Q96D15 328 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CMTM7Q96FZ5 175 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 AIF1LQ9BQI0 150 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC25A23Q9BV35 468 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CADM1Q9BY67 442 aaKnown RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 MRPL1Q9BYD6 325 aaKnown RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ACPTQ9BZG2 426 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TCEAL2Q9H3H9 227 aaPredicted RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 XKR8Q9H6D3 395 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EFCAB1Q9HAE3 211 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PELI2Q9HAT8 420 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BRF2Q9HAW0 419 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TM9SF3Q9HD45 589 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TMEM45AQ9NWC5 275 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NMRK1Q9NWW6 199 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 GEMIN8Q9NWZ8 242 aaKnown RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NDE1Q9NXR1 346 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ASIC5Q9NY37 505 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ZIM2Q9NZV7 527 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DLGAP2Q9P1A6 1054 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TAAR2Q9P1P5 351 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ZNF624Q9P2J8 865 aaPredicted RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 APOBEC3BQ9UH17 382 aaKnown RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ICKQ9UPZ9 632 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 POLR3HQ9Y535 204 aaPredicted RBP7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLCO1B1Q9Y6L6 691 aa7.37□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TNRC6BQ9UPQ9 1833 aaKnown RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TRBV23OR9-2A0A075B6M9 112 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRAMEF33A0A0G2JMD5 474 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 A0A1W2PPV9 198 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FAM234BA2RU67 622 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 BBIP1A8MTZ0 92 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NPIPB8E9PQR5 432 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NR5A2O00482 541 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ANGPT2O15123 496 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NRP2O60462 931 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC22A3O75751 556 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CCNDBP1O95273 360 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 VIPP01282 170 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 WNT1P04628 370 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 G6PDP11413 515 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRPS2P11908 318 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NME1P15531 152 aaKnown RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CD1EP15812 388 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PCSK2P16519 638 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 XRCC1P18887 633 aaPredicted RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ITGAXP20702 1163 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PSMB5P28074 263 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CPOXP36551 454 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PGM1P36871 562 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC19A1P41440 591 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FNTBP49356 437 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CCR8P51685 355 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 KCNK10P57789 538 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 UFM1P61960 85 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 SLC25A3Q00325 362 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DMWDQ09019 674 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PLCL1Q15111 1095 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PRRT3Q5FWE3 981 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 WDR45BQ5MNZ6 344 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ICE2Q659A1 982 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 REP15Q6BDI9 236 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 IYDQ6PHW0 289 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TSSK4Q6SA08 328 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 CYP20A1Q6UW02 462 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 C16orf89Q6UX73 402 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TMIGD1Q6UXZ0 262 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 AMIGO1Q86WK6 493 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FUNDC1Q8IVP5 155 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 RNF175Q8N4F7 328 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 PCYOX1LQ8NBM8 494 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 FAM46DQ8NEK8 389 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 OR2A1Q8NGT9 310 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 HUS1BQ8NHY5 278 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 TSPEARQ8WU66 669 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 ZFPM2Q8WW38 1151 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 LCN9Q8WX39 176 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 DNASE2BQ8WZ79 361 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 EDAQ92838 391 aa7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 UTP4Q969X6 686 aaKnown RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 METTL2AQ96IZ6 378 aaKnown RBP7.36□□□□□ -1.23
SCARNA20.1-201ENST00000516009 NECAB3Q96P71 396 aaPredicted RBP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms