RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 EPCAMP16422 314 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 ERCC2P18074 760 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 CYP2A7P20853 494 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 OPRL1P41146 370 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 DNA2P51530 1060 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 NECTIN1Q15223 517 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 SLC1A5Q15758 541 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 NPTX1Q15818 432 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 ZNF74Q16587 644 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 KYNUQ16719 465 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 TCP11X2Q5H9J9 407 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 CCDC89Q8N998 374 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 RASGEF1AQ8N9B8 481 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 SLC37A3Q8NCC5 494 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 OR6J1Q8NGC5 347 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 OR10Q1Q8NGQ4 319 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 ZNF519Q8TB69 540 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 GATAD1Q8WUU5 269 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 METTL21AQ8WXB1 218 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 SPSB1Q96BD6 273 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 RMDN1Q96DB5 314 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 LRRC3BQ96PB8 259 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 LPAR4Q99677 370 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 RBM4BQ9BQ04 359 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 CABLES2Q9BTV7 478 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 CENPOQ9BU64 300 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 SLC2A11Q9BYW1 496 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 TXLNGYQ9BZA5 131 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 NYXQ9GZU5 481 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 UPF3AQ9H1J1 476 aaKnown RBP4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 PANK4Q9NVE7 773 aa4.12□□□□□ -1.75
SMARCA5-203ENST00000515531 TRAV24A0A0B4J272 114 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 URADA6NGE7 173 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 CASTOR2A6NHX0 329 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 FPGTO14772 594 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 GP1BBP13224 206 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 RPL35AP18077 110 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 PRKACGP22612 351 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 HSD17B3P37058 310 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 CETN2P41208 172 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 TSFMP43897 325 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 CYCSP99999 105 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 ILF2Q12905 390 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 SGCGQ13326 291 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 EFTUD2Q15029 972 aaKnown RBP eCLIP4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 DOK6Q6PKX4 331 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 IL27RAQ6UWB1 636 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 Q6ZRP5 223 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 LSMEM1Q8N8F7 131 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 PI4KAP1Q8N8J0 262 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 ZNRF4Q8WWF5 429 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 MRPS27Q92552 414 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 NSMCE3Q96MG7 304 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 SPAG5Q96R06 1193 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 ATOH8Q96SQ7 321 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 WWTR1Q9GZV5 400 aa4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 XAB2Q9HCS7 855 aaKnown RBP4.11□□□□□ -1.75
SMARCA5-203ENST00000515531 A0A1W2PPK0 400 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 A0A1W2PR80 420 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 ERI2A8K979 691 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 KRTAP16-1A8MUX0 517 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 UBE2CO00762 179 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 TEX28O15482 410 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 GSRP00390 522 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 DNTTP04053 509 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 SP100P23497 879 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 CD27P26842 260 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 HLA-FP30511 346 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 HSPA4P34932 840 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 HNF4AP41235 474 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 GUCY2DQ02846 1103 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 NONOQ15233 471 aaKnown RBP eCLIP4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 MTHFSDQ2M296 383 aaKnown RBP4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 LCE1FQ5T754 118 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 CTR9Q6PD62 1173 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 CHST3Q7LGC8 479 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 KLHDC1Q8N7A1 406 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 CAMKVQ8NCB2 501 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 NUP37Q8NFH4 326 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 TSACCQ96A04 125 aaPredicted RBP4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 MAP3K3Q99759 626 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 CDK19Q9BWU1 502 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 DNAJC4Q9NNZ3 241 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 PAK5Q9P286 719 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 IGSF1Q8N6C5 1336 aa4.1□□□□□ -1.75
SMARCA5-203ENST00000515531 CRLF1O75462 422 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 KRT33AO76009 404 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 IGHEP01854 428 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 ZSCAN5DPP0CG00 497 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 UGT1A4P22310 534 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 UBASH3AP57075 661 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 CSNK2BP67870 215 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 DLK1P80370 383 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 RASGEF1BQ0VAM2 473 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 TRIM29Q14134 588 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 OPCMLQ14982 345 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 PTPN14Q15678 1187 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 EXT1Q16394 746 aa4.09□□□□□ -1.75
SMARCA5-203ENST00000515531 TAF1BQ53T94 588 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms