RNA–Protein interactions for RNA: ENST00000514893.5

NEDD4-211, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene NEDD4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-211ENST00000514893 UCNP55089 124 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 RIPK4P57078 832 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 TRIM29Q14134 588 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 UGT3A2Q3SY77 523 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 SYT14P1Q58G82 188 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 IQCHQ86VS3 1027 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 HIPK1Q86Z02 1210 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 LGI2Q8N0V4 545 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 AVL9Q8NBF6 648 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 MORC4Q8TE76 937 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 SSC4DQ8WTU2 575 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 ESAMQ96AP7 390 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 NUS1Q96E22 293 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 LRRCC1Q9C099 1032 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 SPATC1LQ9H0A9 340 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 PRDM4Q9UKN5 801 aa2.51□□□□□ -2.01
NEDD4-211ENST00000514893 ZNF644Q9H582 1327 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-211ENST00000514893 ARPC2O15144 300 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 MITFO75030 526 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-211ENST00000514893 SMIM18P0DKX4 95 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 GABRB1P18505 474 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 PKLRP30613 574 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 NDST2P52849 883 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 TMF1P82094 1093 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 KIAA0141Q14154 515 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-211ENST00000514893 PHKG1Q16816 387 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 LINC00242Q5T6M2 205 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 WSCD1Q658N2 575 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 LDB1Q86U70 411 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-211ENST00000514893 NDUFAF2Q8N183 169 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 RFFLQ8WZ73 363 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 CCDC34Q96HJ3 373 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 CCDC28BQ9BUN5 200 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 TLE6Q9H808 572 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 STK26Q9P289 416 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 ELF5Q9UKW6 265 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-211ENST00000514893 CORO1CQ9ULV4 474 aaPredicted RBP2.5□□□□□ -2.01
NEDD4-211ENST00000514893 CHKBQ9Y259 395 aa2.5□□□□□ -2.01
NEDD4-211ENST00000514893 WI2-2373I1.2A0A1W2PRP0 233 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 TLX2O43763 284 aaPredicted RBP2.49□□□□□ -2.01
NEDD4-211ENST00000514893 TMEM63AO94886 807 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 MT-ND1P03886 318 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 RB1P06400 928 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 PROS1P07225 676 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 AADACP22760 399 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 ACSL1P33121 698 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 ALDH3A2P51648 485 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 RIDAP52758 137 aaKnown RBP2.49□□□□□ -2.01
NEDD4-211ENST00000514893 CDH8P55286 799 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 SRPXP78539 464 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 MAT1AQ00266 395 aaKnown RBP2.49□□□□□ -2.01
NEDD4-211ENST00000514893 THOC1Q96FV9 657 aaKnown RBP2.49□□□□□ -2.01
NEDD4-211ENST00000514893 HRH4Q9H3N8 390 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 PDP2Q9P2J9 529 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 CRYL1Q9Y2S2 319 aa2.49□□□□□ -2.01
NEDD4-211ENST00000514893 IGSF1Q8N6C5 1336 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 ARHGEF33A8MVX0 844 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 CDRT15L2A8MXV6 281 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 IFRD1O00458 451 aaPredicted RBP2.48□□□□□ -2.01
NEDD4-211ENST00000514893 TXNL1O43396 289 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 OR2C1O95371 312 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 GJA1P17302 382 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 KRTAP10-10P60014 251 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 ACY1Q03154 408 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 NOL8Q76FK4 1167 aaKnown RBP2.48□□□□□ -2.01
NEDD4-211ENST00000514893 PIGBQ92521 554 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 SRSF8Q9BRL6 282 aaKnown RBP2.48□□□□□ -2.01
NEDD4-211ENST00000514893 MUC13Q9H3R2 512 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 UBN1Q9NPG3 1134 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 ZNF69Q9UC07 566 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 WBP11Q9Y2W2 641 aaKnown RBP2.48□□□□□ -2.01
NEDD4-211ENST00000514893 PIAS3Q9Y6X2 628 aa2.48□□□□□ -2.01
NEDD4-211ENST00000514893 RUSC2Q8N2Y8 1516 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 IGHV3-20A0A0C4DH32 117 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 TRBV4-1A0A0J9YWV2 114 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 TRBV5-5A0A0J9YX44 114 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 LNP1A1A4G5 178 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 RPL37AP8A6NKH3 93 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 E7ENQ6 273 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 SLC1A7O00341 560 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 MTRF1O75570 445 aaKnown RBP2.47□□□□□ -2.01
NEDD4-211ENST00000514893 BAIAP3O94812 1187 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 RTN3O95197 1032 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-211ENST00000514893 ZWINTO95229 277 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 HMGB1P09429 215 aaKnown RBP2.47□□□□□ -2.01
NEDD4-211ENST00000514893 CLTBP09497 229 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 PTPN3P26045 913 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 CXCL9Q07325 125 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 TRA2AQ13595 282 aaKnown RBP eCLIP2.47□□□□□ -2.01
NEDD4-211ENST00000514893 UPP1Q16831 310 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 LEMD1Q68G75 181 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 DHRS7BQ6IAN0 325 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-211ENST00000514893 CHST9Q7L1S5 443 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 TMEM173Q86WV6 379 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-211ENST00000514893 RPAP2Q8IXW5 612 aaPredicted RBP2.47□□□□□ -2.01
NEDD4-211ENST00000514893 THAP8Q8NA92 274 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 ZNF799Q96GE5 643 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 ZMYND12Q9H0C1 365 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 DPP3Q9NY33 737 aa2.47□□□□□ -2.01
NEDD4-211ENST00000514893 AUP1Q9Y679 476 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms