RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 YJEFN3A6XGL0 299 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 SLC25A14O95258 325 aaPredicted RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 HCAR3P49019 387 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 DAOAP59103 153 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 ASB18Q6ZVZ8 466 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 TAC4Q86UU9 113 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 OR13F1Q8NGS4 319 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 PIWIL1Q96J94 861 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 ARHGAP39Q9C0H5 1083 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 KCNN2Q9H2S1 579 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 TMLHEQ9NVH6 421 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 CLEC4AQ9UMR7 237 aa10.97□□□□□ -0.65
TCOF1-211ENST00000513346 OAS3Q9Y6K5 1087 aaKnown RBP10.97□□□□□ -0.65
TCOF1-211ENST00000513346 AGAP5A6NIR3 686 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 GRM6O15303 877 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 ACSL4O60488 711 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 UGT2B17O75795 530 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 DIRAS1O95057 198 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 ELFN1P0C7U0 828 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 HTR1BP28222 390 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 SKP1P63208 163 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 EMX2Q04743 252 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 CSTF1Q05048 431 aaKnown RBP10.96□□□□□ -0.65
TCOF1-211ENST00000513346 TIGD5Q53EQ6 642 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 SNAP47Q5SQN1 464 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 LYPLAL1Q5VWZ2 237 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 FAM151BQ6UXP7 276 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 SLITRK4Q8IW52 837 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 OR52L1Q8NGH7 329 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 OR10Q1Q8NGQ4 319 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 CRYGNQ8WXF5 182 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 MED11Q9P086 117 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 STON1Q9Y6Q2 735 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 PKD1L3Q7Z443 1732 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 PLOD2O00469 737 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 EEDO75530 441 aaKnown RBP10.96□□□□□ -0.65
TCOF1-211ENST00000513346 APOL3O95236 402 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF806P0C7X5 589 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 NR2F1P10589 423 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 FAUP35544 74 aaKnown RBP10.96□□□□□ -0.65
TCOF1-211ENST00000513346 MAP2K3P46734 347 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 DEFA5Q01523 94 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 DPY19L1Q2PZI1 675 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 CXorf57Q6NSI4 855 aaKnown RBP10.96□□□□□ -0.65
TCOF1-211ENST00000513346 HMBOX1Q6NT76 420 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 ZNF613Q6PF04 617 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 PRSS48Q7RTY5 328 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 ADGRD2Q7Z7M1 963 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 KIF18BQ86Y91 864 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 IQCF2Q8IXL9 164 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 OR10T2Q8NGX3 314 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 PPCDCQ96CD2 204 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 MYO19Q96H55 970 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 CDK15Q96Q40 435 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 BARD1Q99728 777 aaKnown RBP10.96□□□□□ -0.65
TCOF1-211ENST00000513346 MYOCQ99972 504 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 RPS6KB2Q9UBS0 482 aa10.96□□□□□ -0.65
TCOF1-211ENST00000513346 CLIC1O00299 241 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 KMOO15229 486 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 KIAA0513O60268 411 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 RLN1P04808 185 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 PRKACAP17612 351 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 AP3S2P59780 193 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 ST3GAL4Q11206 333 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 RPA4Q13156 261 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 CBLBQ13191 982 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 SF3B4Q15427 424 aaKnown RBP eCLIP10.96□□□□□ -0.669e-7■■■■□ 20
TCOF1-211ENST00000513346 TAPT1Q6NXT6 567 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF367Q7RTV3 350 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 TAS1R3Q7RTX0 852 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 BRSK1Q8TDC3 778 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 SLC35F5Q8WV83 523 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 UBE2E3Q969T4 207 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 CXorf40BQ96DE9 158 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 QRFPRQ96P65 431 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 IL4I1Q96RQ9 567 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 GULP1Q9UBP9 304 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 IRAK3Q9Y616 596 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 CRYBG1Q9Y4K1 1723 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 ARPC4-TTLL3A0A0A6YYG9 625 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 ANKRD34BA5PLL1 514 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 OR51F1A6NGY5 319 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 ZNF10P21506 573 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-211ENST00000513346 CRHBPP24387 322 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 SLC10A2Q12908 348 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-211ENST00000513346 NHSL2Q5HYW2 709 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 DPY19L2P1Q6NXN4 242 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 DUS1LQ6P1R4 473 aaKnown RBP10.96□□□□□ -0.66
TCOF1-211ENST00000513346 PRSS55Q6UWB4 352 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-211ENST00000513346 GET4Q7L5D6 327 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-211ENST00000513346 PIM3Q86V86 326 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 TMEM203Q969S6 136 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 PCYT2Q99447 389 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 CHIAQ9BZP6 476 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 MKL2Q9ULH7 1088 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 GPSM3Q9Y4H4 160 aa10.96□□□□□ -0.66
TCOF1-211ENST00000513346 CHURC1-FNTBB4DL54 471 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 REM1O75628 298 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 CDK14O94921 469 aa10.95□□□□□ -0.66
TCOF1-211ENST00000513346 AMD1P17707 334 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms