RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 EEF1DP29692 281 aaKnown RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 PTGS2P35354 604 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 HMGCLP35914 325 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 MARCKSL1P49006 195 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 EMP2P54851 167 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 SLC10A2Q12908 348 aaPredicted RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 KEAP1Q14145 624 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 FASTKQ14296 549 aaKnown RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 PAFAH1B3Q15102 231 aaKnown RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 PPP2R5EQ16537 467 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 IFI16Q16666 785 aaKnown RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 ACER2Q5QJU3 275 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 TIGD7Q6NT04 549 aaPredicted RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 ADGRD1Q6QNK2 874 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 KDELC1Q6UW63 502 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 MICALCLQ6ZW33 695 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 CXorf67Q86X51 503 aaPredicted RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 LIX1LQ8IVB5 337 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 SLC35F6Q8N357 371 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 OR5AR1Q8NGP9 310 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 SPATA22Q8NHS9 363 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 HM13Q8TCT9 377 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 DTX3LQ8TDB6 740 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 KRT35Q92764 455 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 IMP4Q96G21 291 aaKnown RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 CALR3Q96L12 384 aaKnown RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 ZNF285Q96NJ3 590 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 COG4Q9H9E3 785 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 NEUROD4Q9HD90 331 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 RYDENQ9NUL5 291 aaKnown RBP8.64□□□□□ -1.03
NUP54-211ENST00000512151 MKL2Q9ULH7 1088 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 PLAGL1Q9UM63 463 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 EDARQ9UNE0 448 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 ZNF407Q9C0G0 2248 aa8.64□□□□□ -1.03
NUP54-211ENST00000512151 IGLV3-12A0A075B6K2 115 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 LOC102723996A0A087X1L8 192 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 GLYATL1P3A0A0U1RQE8 302 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 FITM1A5D6W6 292 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 CRLF1O75462 422 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 NDST3O95803 873 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 TNNT1P13805 278 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 ZNF24P17028 368 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 CD53P19397 219 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 GJC1P36383 396 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 SLC1A1P43005 524 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 SSR1P43307 286 aaKnown RBP8.63□□□□□ -1.03
NUP54-211ENST00000512151 GBE1Q04446 702 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 OCA2Q04671 838 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 GRM7Q14831 915 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 SHEQ5VZ18 495 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 C16orf47Q6ZP98 133 aaPredicted RBP8.63□□□□□ -1.03
NUP54-211ENST00000512151 SIMC1Q8NDZ2 872 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 ARMC2Q8NEN0 867 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 FAM71BQ8TC56 605 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 KCTD12Q96CX2 325 aaKnown RBP8.63□□□□□ -1.03
NUP54-211ENST00000512151 PLEKHF2Q9H8W4 249 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 ZNF304Q9HCX3 659 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 ENAMQ9NRM1 1142 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 SMOXQ9NWM0 555 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 ZNF282Q9UDV7 671 aaPredicted RBP8.63□□□□□ -1.03
NUP54-211ENST00000512151 LCMT1Q9UIC8 334 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 CBLCQ9ULV8 474 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 CUBNO60494 3623 aa8.63□□□□□ -1.03
NUP54-211ENST00000512151 IGHV3-20A0A0C4DH32 117 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 C3orf70A6NLC5 250 aaPredicted RBP8.62□□□□□ -1.03
NUP54-211ENST00000512151 ISM1B1AKI9 464 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 SPOPO43791 374 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 NEURL1O76050 574 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 SP1P08047 785 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 CXCR2P25025 360 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 CTNNA2P26232 953 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 KIR2DL3P43628 341 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 PRLHRP49683 370 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 DCAF7P61962 342 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 PCBP2Q15366 365 aaKnown RBP eCLIP8.62□□□□□ -1.032e-6■■■■■ 27.6
NUP54-211ENST00000512151 HADHQ16836 314 aaKnown RBP8.62□□□□□ -1.03
NUP54-211ENST00000512151 BOLA3Q53S33 107 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 Q5PR19 223 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 ZNF468Q5VIY5 522 aaPredicted RBP8.62□□□□□ -1.03
NUP54-211ENST00000512151 YOD1Q5VVQ6 348 aaPredicted RBP8.62□□□□□ -1.03
NUP54-211ENST00000512151 H3F3CQ6NXT2 135 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 AADACL2Q6P093 401 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 PEX26Q7Z412 305 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 CRLF3Q8IUI8 442 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 SHISA5Q8N114 240 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 RAPGEF5Q92565 580 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 ALG3Q92685 438 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 TFGQ92734 400 aaPredicted RBP8.62□□□□□ -1.03
NUP54-211ENST00000512151 HES6Q96HZ4 224 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 C16orf45Q96MC5 204 aaPredicted RBP8.62□□□□□ -1.03
NUP54-211ENST00000512151 IL1RAPL1Q9NZN1 696 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 AMFRQ9UKV5 643 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 PCDHA3Q9Y5H8 950 aa8.62□□□□□ -1.03
NUP54-211ENST00000512151 HYKKA2RU49 373 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 KLHL33A6NCF5 533 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 GOLGA6L9A6NEM1 432 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TRIM64A6NGJ6 449 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 TRIM64BA6NI03 449 aa8.61□□□□□ -1.03
NUP54-211ENST00000512151 IFRD1O00458 451 aaPredicted RBP8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms