RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	HAT1	O14929	419 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	LCMT2	O60294	686 aa	Known RBP	13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	STK16	O75716	305 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	CPA3	P15088	417 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	ITIH1	P19827	911 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	CDH3	P22223	829 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	CCKBR	P32239	447 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	HNMT	P50135	292 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	CSNK1G2	P78368	415 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	NFKB2	Q00653	900 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	PRKAA1	Q13131	559 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	CCDC153	Q494R4	210 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	ZNF678	Q5SXM1	525 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	SLCO4C1	Q6ZQN7	724 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	TMPRSS7	Q7RTY8	843 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	CROCCP2	Q86T23	111 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	DNAJC22	Q8N4W6	341 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	TEX9	Q8N6V9	391 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	ANKRD42	Q8N9B4	389 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	OR6Y1	Q8NGX8	325 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	ATL1	Q8WXF7	558 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	ZDHHC12	Q96GR4	267 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	PRAP1	Q96NZ9	151 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	DPH7	Q9BTV6	452 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	GSTO2	Q9H4Y5	243 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	ZNF395	Q9H8N7	513 aa	Predicted RBP	13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	APMAP	Q9HDC9	416 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	MRPS30	Q9NP92	439 aa	Known RBP	13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	KCNK9	Q9NPC2	374 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	C1GALT1	Q9NS00	363 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	DNAJC11	Q9NVH1	559 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	SENP1	Q9P0U3	644 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	PILRA	Q9UKJ1	303 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	KLK13	Q9UKR3	277 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	CLCA2	Q9UQC9	943 aa		13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	MDC1	Q14676	2089 aa	Known RBP	13.98	□□□□□ -0.17
MATR3-238	ENST00000512107	LOC105369274	A0A096LPK9	316 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	LOC102723532	A0A0G2JNH3	316 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	MED19	A0JLT2	244 aa	Predicted RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	FEZF1	A0PJY2	475 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	WDR91	A4D1P6	747 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	OR2A25	A4D2G3	310 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107		H3BMH7	237 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107		K7EPI3	171 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	UBFD1	O14562	309 aa	Known RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	SMIM24	O75264	130 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	RASSF9	O75901	435 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	IPO13	O94829	963 aa	Known RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	MED26	O95402	600 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	S100B	P04271	92 aa	Predicted RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	BPGM	P07738	259 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	ANKRD34C	P0C6C1	535 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	MYL2	P10916	166 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	FGF3	P11487	239 aa	Predicted RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	NELFE	P18615	380 aa	Known RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	SDHB	P21912	280 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	FOXC1	Q12948	553 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	CAMK2B	Q13554	666 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	GPR19	Q15760	415 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	CLPP	Q16740	277 aa	Predicted RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	THEMIS2	Q5TEJ8	643 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	PRAMEF17	Q5VTA0	474 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	FRMPD2B	Q6IN97	320 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	KLHL35	Q6PF15	583 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	ZCCHC23	Q6ZST2	131 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	FAM129C	Q86XR2	697 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	OR4N4	Q8N0Y3	316 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	SHISA5	Q8N114	240 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	TCAIM	Q8N3R3	496 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	D2HGDH	Q8N465	521 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	C19orf47	Q8N9M1	422 aa	Known RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	SNX31	Q8N9S9	440 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	OR52B6	Q8NGF0	335 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	MGARP	Q8TDB4	240 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	CDK15	Q96Q40	435 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	PLCD4	Q9BRC7	762 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	GATA5	Q9BWX5	397 aa	Predicted RBP	13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	C1QTNF3	Q9BXJ4	246 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	ZMYND15	Q9H091	742 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	OXSM	Q9NWU1	459 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	KLK4	Q9Y5K2	254 aa		13.97	□□□□□ -0.17
MATR3-238	ENST00000512107	SPTB	P11277	2137 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	KCNE1B	A0A087WTH5	132 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	KDM1A	O60341	852 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	IMPDH1	P20839	514 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	CMPK1	P30085	196 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	BCL6	P41182	706 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	SERPINB4	P48594	390 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	CDC16	Q13042	620 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	GTF2H2	Q13888	395 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	GTF2H2C	Q6P1K8	395 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	NXPE4	Q6UWF7	544 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	LRRC70	Q7Z2Q7	622 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	VN1R5	Q7Z5H4	357 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	TMPRSS11B	Q86T26	416 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	LSMEM2	Q8N112	164 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	RNF175	Q8N4F7	328 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	RAB42	Q8N4Z0	105 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	DTWD1	Q8N5C7	304 aa		13.96	□□□□□ -0.17
MATR3-238	ENST00000512107	CCDC63	Q8NA47	563 aa		13.96	□□□□□ -0.17

Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms