RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CREG1O75629 220 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 STATHP02808 62 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 PRB1P04280 392 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 FURINP09958 794 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 AGXTP21549 392 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 ALAS2P22557 587 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 PTPN4P29074 926 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 ARF3P61204 181 aaPredicted RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 RPS15P62841 145 aaKnown RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 LY6DQ14210 128 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 SLMAPQ14BN4 828 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 UAP1Q16222 522 aaPredicted RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 ZXDCQ2QGD7 858 aaPredicted RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 DEFB109BQ30KR1 87 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 LINC00303Q3SY05 128 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 WASHC2DQ5SRD0 308 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 GRTP1Q5TC63 336 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 ZNF385CQ66K41 422 aaPredicted RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 ZNF425Q6IV72 752 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 ZNF517Q6ZMY9 492 aaPredicted RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 RNF44Q7L0R7 432 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 DTWD1Q8N5C7 304 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 METTL27Q8N6F8 245 aaPredicted RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 ENDOVQ8N8Q3 282 aaKnown RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 PYCR2Q96C36 320 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 TSPAN17Q96FV3 270 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 PRAP1Q96NZ9 151 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 GBP5Q96PP8 586 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 CDC42EP4Q9H3Q1 356 aaKnown RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 TXLNGQ9NUQ3 528 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 CTNNAL1Q9UBT7 734 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 NDOR1Q9UHB4 597 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 NFU1Q9UMS0 254 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 FARSAQ9Y285 508 aaKnown RBP13.38□□□□□ -0.27
DDX41-212ENST00000511040 PCDHGA6Q9Y5G7 932 aa13.38□□□□□ -0.27
DDX41-212ENST00000511040 HAT1O14929 419 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 WISP3O95389 354 aaPredicted RBP13.37□□□□□ -0.27
DDX41-212ENST00000511040 MED26O95402 600 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 CAPN1P07384 714 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 FAM87AP0C7U9 286 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 STMN1P16949 149 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 SPRP35270 261 aaPredicted RBP13.37□□□□□ -0.27
DDX41-212ENST00000511040 FOXL2P58012 376 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 ABATP80404 500 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 MC1RQ01726 317 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 BMPR2Q13873 1038 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 GRM7Q14831 915 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 NAA25Q14CX7 972 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 TSNQ15631 228 aaKnown RBP13.37□□□□□ -0.27
DDX41-212ENST00000511040 PPP1R3AQ16821 1122 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 MLIPQ5VWP3 458 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 RHBDD2Q6NTF9 364 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 CEP128Q6ZU80 1094 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 TTLL10Q6ZVT0 673 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 CMC1Q7Z7K0 106 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 TTC29Q8NA56 475 aaPredicted RBP13.37□□□□□ -0.27
DDX41-212ENST00000511040 UHMK1Q8TAS1 419 aaKnown RBP13.37□□□□□ -0.27
DDX41-212ENST00000511040 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.37□□□□□ -0.27
DDX41-212ENST00000511040 SLC39A7Q92504 469 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 FBXL8Q96CD0 374 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 ZNF285Q96NJ3 590 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 ZFYVE21Q9BQ24 234 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 ARHGAP9Q9BRR9 750 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 SGPP1Q9BX95 441 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 GPR87Q9BY21 358 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 FAM129AQ9BZQ8 928 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 POPDC3Q9HBV1 291 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 CUTCQ9NTM9 273 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 ANKMY1Q9P2S6 941 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 SRPK3Q9UPE1 567 aa13.37□□□□□ -0.27
DDX41-212ENST00000511040 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 HEATR5BQ9P2D3 2071 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 HYKKA2RU49 373 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 C9J4A7 227 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 SRPX2O60687 465 aaPredicted RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 ITGB2P05107 769 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 ENO2P09104 434 aaPredicted RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 CCDC166P0CW27 439 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 CDH1P12830 882 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 ITGAXP20702 1163 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 PHBP35232 272 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 AP1S2P56377 157 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 RAB10P61026 200 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 DCDP81605 110 aaKnown RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 ILF2Q12905 390 aaKnown RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 NAB1Q13506 487 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 IL10RAQ13651 578 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 CSHL1Q14406 222 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 NCF4Q15080 339 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 C18orf21Q32NC0 220 aaPredicted RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 TCTE1Q5JU00 501 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 CAPN13Q6MZZ7 669 aaPredicted RBP13.36□□□□□ -0.27
DDX41-212ENST00000511040 RAPH1Q70E73 1250 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 FRA10AC1Q70Z53 315 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 C17orf64Q86WR6 236 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 RELL1Q8IUW5 271 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 TMEM151BQ8IW70 566 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 IFT20Q8IY31 132 aa13.36□□□□□ -0.27
DDX41-212ENST00000511040 CSNK1A1LQ8N752 337 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms