RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 ZSCAN9O15535 394 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 CMPK1P30085 196 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 GP5P40197 560 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 ARF3P61204 181 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 MEF2AQ02078 507 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 PRDX1Q06830 199 aaKnown RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 USP10Q14694 798 aaKnown RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 OR4D1Q15615 310 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 HKDC1Q2TB90 917 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 WASHC2DQ5SRD0 308 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 RHBDD2Q6NTF9 364 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 TTLL10Q6ZVT0 673 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 CYS1Q717R9 158 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 COX15Q7KZN9 410 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 MNS1Q8NEH6 495 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 GABPB2Q8TAK5 448 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 MCOLN3Q8TDD5 553 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 N4BP2L2Q92802 583 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 ZUFSPQ96AP4 578 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 KIAA1143Q96AT1 154 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 PTERQ96BW5 349 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 MED8Q96G25 268 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 PDLIM5Q96HC4 596 aaKnown RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 C10orf90Q96M02 699 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 CCDC138Q96M89 665 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 LRFN5Q96NI6 719 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 UBL7Q96S82 380 aaPredicted RBP12.98□□□□□ -0.33
SNF8-206ENST00000509989 CPNE1Q99829 537 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 SELENOSQ9BQE4 189 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 SYTL2Q9HCH5 934 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 GPAMQ9HCL2 828 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 IRAK4Q9NWZ3 460 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 NFU1Q9UMS0 254 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 BOD1L1Q8NFC6 3051 aa12.98□□□□□ -0.33
SNF8-206ENST00000509989 DOCK10Q96BY6 2186 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 FEZF1A0PJY2 475 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 TARM1B6A8C7 271 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 K7EM74 188 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 SLC16A5O15375 505 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 LCMT2O60294 686 aaKnown RBP12.97□□□□□ -0.33
SNF8-206ENST00000509989 CREG1O75629 220 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 ACSL3O95573 720 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 MT-ND3P03897 115 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 TUBB4AP04350 444 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 EIF2S1P05198 315 aaKnown RBP12.97□□□□□ -0.33
SNF8-206ENST00000509989 GSTA2P09210 222 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 MYBL2P10244 700 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 NPPBP16860 134 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 PTPN4P29074 926 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 GDF5P43026 501 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 OR1D4P47884 311 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 IRF9Q00978 393 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 RHDQ02161 417 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 CHAF1BQ13112 559 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 SP140Q13342 867 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 ZKSCAN8Q15776 578 aaPredicted RBP12.97□□□□□ -0.33
SNF8-206ENST00000509989 TAF1BQ53T94 588 aaPredicted RBP12.97□□□□□ -0.33
SNF8-206ENST00000509989 THEMIS2Q5TEJ8 643 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 PRAMEF13Q5VWM6 474 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 GPR135Q8IZ08 494 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 RAB42Q8N4Z0 105 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 SLC39A7Q92504 469 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 ESAMQ96AP7 390 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 OR2A5Q96R48 311 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 SGPP1Q9BX95 441 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 ARL15Q9NXU5 204 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 FARSAQ9Y285 508 aaKnown RBP12.97□□□□□ -0.33
SNF8-206ENST00000509989 PCDHGA6Q9Y5G7 932 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 MAU2Q9Y6X3 613 aa12.97□□□□□ -0.33
SNF8-206ENST00000509989 BSNQ9UPA5 3926 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ERVH48-1M5A8F1 160 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 TAPBPO15533 448 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 MAP3K7O43318 606 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 KLF7O75840 302 aaPredicted RBP12.96□□□□□ -0.33
SNF8-206ENST00000509989 DNAJB5O75953 348 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 SLC35E2BP0CK96 405 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CCDC166P0CW27 439 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CDH1P12830 882 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CD1DP15813 335 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ALAS2P22557 587 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CSRP3P50461 194 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CSNK1G2P78368 415 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 POU4F1Q01851 419 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 COLEC12Q5KU26 742 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CATSPEREQ5SY80 951 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 GRTP1Q5TC63 336 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 MLIPQ5VWP3 458 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CPZQ66K79 652 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 TLDC1Q6P9B6 456 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CYB5D1Q6P9G0 228 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 SHISA6Q6ZSJ9 500 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 VN1R4Q7Z5H5 301 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ADCK2Q7Z695 626 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ARHGEF39Q8N4T4 335 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CEP112Q8N8E3 955 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ZSCAN1Q8NBB4 408 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ZNF740Q8NDX6 193 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 OR56A3Q8NH54 315 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 ADAMTS17Q8TE56 1095 aa12.96□□□□□ -0.33
SNF8-206ENST00000509989 CDKL2Q92772 493 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms