RNA–Protein interactions for RNA: ENST00000508869.5

TMCC1-208, Transcript of transmembrane and coiled-coil domain family 1, humanhuman

TSL 3

Gene TMCC1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC1-208ENST00000508869 TULP2O00295 520 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 EIF3FO00303 357 aaPredicted RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 BUB3O43684 328 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 KLF8O95600 359 aaPredicted RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 PMS2P2O95744 297 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 OAS1P00973 400 aaKnown RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 IGHV4-30-4P0DP06 118 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 ODC1P11926 461 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 ZNF8P17098 575 aaPredicted RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 CNTFP26441 200 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 KRT2P35908 639 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 TUFMP49411 452 aaKnown RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 BLKP51451 505 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 PEX3P56589 373 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 SLC7A9P82251 487 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 ZNF33AQ06730 810 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 TBL3Q12788 808 aaKnown RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 DMP1Q13316 513 aaPredicted RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 EFR3AQ14156 821 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 IL17AQ16552 155 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 NFIL3Q16649 462 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 KRTAP24-1Q3LI83 254 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 CFAP221Q4G0U5 840 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 SDHAF4Q5VUM1 108 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 WSCD1Q658N2 575 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 HIST2H2BCQ6DN03 193 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 HIST2H2BDQ6DRA6 164 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 SLC22A25Q6T423 547 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 KLHL24Q6TFL4 600 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 TBC1D26Q86UD7 250 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 GPAT4Q86UL3 456 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 SPPL2BQ8TCT7 592 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 RND1Q92730 232 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 MPP4Q96JB8 637 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 ZSCAN31Q96LW9 406 aaPredicted RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 GABRG3Q99928 467 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 TRIM9Q9C026 710 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 C17orf75Q9HAS0 396 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 DUS2Q9NX74 493 aaKnown RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 RRN3Q9NYV6 651 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 CISD1Q9NZ45 108 aaKnown RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 IL1RAPL1Q9NZN1 696 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 PDP2Q9P2J9 529 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 CPSF3Q9UKF6 684 aaKnown RBP3.8□□□□□ -1.8
TMCC1-208ENST00000508869 KCNS2Q9ULS6 477 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 NFE2L3Q9Y4A8 694 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 KIF26BQ2KJY2 2108 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 SCN8AQ9UQD0 1980 aa3.8□□□□□ -1.8
TMCC1-208ENST00000508869 NBASA2RRP1 2371 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 CPED1A4D0V7 1026 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 FAM149AA5PLN7 773 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 ARHGEF35A5YM69 484 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 TRABD2BA6NFA1 517 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 PP2D1A8MPX8 630 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 E9PMD0 336 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 CLGNO14967 610 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 SLC16A4O15374 487 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 HOXC11O43248 304 aaPredicted RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 PAPSS1O43252 624 aaPredicted RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 TSPAN3O60637 253 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 BAG4O95429 457 aaKnown RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 IGLV3-19P01714 112 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 CLTAP09496 248 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 OR52Z1P0C646 297 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 CSH1P0DML2 217 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 CSH2P0DML3 217 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 HSD3B1P14060 373 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 DAOP14920 347 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 CYP2F1P24903 491 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 EIF2S3P41091 472 aaKnown RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 CCT5P48643 541 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 PEX5P50542 639 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 ZNF131P52739 623 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 SLC12A3P55017 1021 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 NR1H2P55055 460 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 GEMIN4P57678 1058 aaKnown RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 YWHAZP63104 245 aaKnown RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 EFNB1P98172 346 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 GFPT1Q06210 699 aaPredicted RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 SMARCB1Q12824 385 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 BFSP1Q12934 665 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 ORC2Q13416 577 aaPredicted RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 ENPP2Q13822 863 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 VEPH1Q14D04 833 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 MMEL1Q495T6 779 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 HYIQ5T013 277 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 WBP2NLQ6ICG8 309 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 JADE1Q6IE81 842 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 FAM171BQ6P995 826 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 RABEPKQ7Z6M1 372 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 DIS3L2Q8IYB7 885 aaKnown RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 MUC20Q8N307 709 aaPredicted RBP3.79□□□□□ -1.8
TMCC1-208ENST00000508869 PDCL2Q8N4E4 241 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 HDDC3Q8N4P3 179 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 DEFB119Q8N690 84 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 PAF1Q8N7H5 531 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 ZNF441Q8N8Z8 693 aa3.79□□□□□ -1.8
TMCC1-208ENST00000508869 TRIML1Q8N9V2 468 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms