RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 SNRNP25Q9BV90 132 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 CHID1Q9BWS9 393 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PCBD2Q9H0N5 130 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 DUSP15Q9H1R2 295 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 PNPLA8Q9NP80 782 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 POLE3Q9NRF9 147 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SDHAF3Q9NRP4 125 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 MOCS1Q9NZB8 636 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 THAP10Q9P2Z0 257 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ENOPH1Q9UHY7 261 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 TNPO3Q9Y5L0 923 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 ARL5AQ9Y689 179 aa2.88□□□□□ -1.95
NEDD4-208ENST00000508342 SPTAN1Q13813 2472 aaKnown RBP2.88□□□□□ -1.95
NEDD4-208ENST00000508342 A0A1B0GVC2 190 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MASP2O00187 686 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 BTN3A1O00481 513 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PLD2O14939 933 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SNX4O95219 450 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MYL12AP19105 171 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 COPAP53621 1224 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PLOD1Q02809 727 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ST3GAL1Q11201 340 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CDH17Q12864 832 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MTM1Q13496 603 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RCAN2Q14206 197 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TAF1AQ15573 450 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF800Q2TB10 664 aaPredicted RBP eCLIP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FAM69BQ5VUD6 431 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 AGAP7PQ5VUJ5 663 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 DUPD1Q68J44 220 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SPOCD1Q6ZMY3 1216 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LRRC6Q86X45 466 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PSTKQ8IV42 348 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CMTM5Q96DZ9 223 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MMABQ96EY8 250 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ITCHQ96J02 903 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FAM84AQ96KN4 292 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 AGAP4Q96P64 663 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FAM111AQ96PZ2 611 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 UBL7Q96S82 380 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 COQ7Q99807 217 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SDCBP2Q9H190 292 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 METTL7AQ9H8H3 244 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NMUR1Q9HB89 426 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ZFP69BQ9UJL9 534 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHGC4Q9Y5F7 938 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 C2orf16Q68DN1 1984 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CACNA1CQ13936 2221 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SNRNP200O75643 2136 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 STX16-NPEPL1H3BU86 382 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HRO43593 1189 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 BUD23O43709 281 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LRP3O75074 770 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PDE9AO76083 593 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HAUS5O94927 633 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ATP1B2P14415 290 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ETV3P41162 512 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PCYT1AP49585 367 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SUOXP51687 545 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RPS6KA3P51812 740 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PSMA6P60900 246 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 YPEL5P62699 121 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CBX3Q13185 183 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SEL1L3Q68CR1 1132 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 GALNT18Q6P9A2 607 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TRIM40Q6P9F5 258 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 FIP1L1Q6UN15 594 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CCBE1Q6UXH8 406 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KCTD8Q6ZWB6 473 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 LRRTM3Q86VH5 581 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 GPR65Q8IYL9 337 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 GOLM1Q8NBJ4 401 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 TRPV3Q8NET8 790 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 SEMA4DQ92854 862 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ELF4Q99607 663 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KIFC1Q9BW19 673 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PRR14Q9BWN1 585 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HAPLN2Q9GZV7 340 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PLEKHA1Q9HB21 404 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 WASH6PQ9NQA3 447 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 KLHL1Q9NR64 748 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MBD1Q9UIS9 605 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ATXN7L1Q9ULK2 861 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 ANGPT4Q9Y264 503 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RUVBL1Q9Y265 456 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 MAGED1Q9Y5V3 778 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 DGKBQ9Y6T7 804 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HAX1O00165 279 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 CCRL2O00421 344 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 AIM2O14862 343 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 NDUFS4O43181 175 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HOXC11O43248 304 aaPredicted RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 RGS14O43566 566 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PLRG1O43660 514 aaKnown RBP2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PGLSO95336 258 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 HEXAP06865 529 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PRG2P13727 222 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 GABRG2P18507 467 aa2.87□□□□□ -1.95
NEDD4-208ENST00000508342 PROZP22891 400 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms