RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 STOX2Q9P2F5 926 aaPredicted RBP12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 ZC3H7BQ9UGR2 993 aaKnown RBP12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 TAC3Q9UHF0 121 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 NTNG1Q9Y2I2 539 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 PCDHGA10Q9Y5H3 936 aa12.41□□□□□ -0.42
HMGCS1-205ENST00000508319 ITPR2Q14571 2701 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 IGLV3-12A0A075B6K2 115 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 SDR42E2A6NKP2 422 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 H0YGG7 62 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 GOLGA8MH3BSY2 632 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 KIF5CO60282 957 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 PHF2O75151 1096 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 CBX6O95503 412 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 SLC16A8O95907 504 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 CATP04040 527 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 EIF2S1P05198 315 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ERVK-10P10266 1014 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 RPA3P35244 121 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 COILP38432 576 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 SLC1A2P43004 574 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 PNLIPRP1P54315 467 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ARF3P61204 181 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 Q0VFX4 171 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 CTBP1Q13363 440 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 CUL1Q13616 776 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 NR6A1Q15406 480 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 RBBP7Q16576 425 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 HIF1AQ16665 826 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 MUM1Q2TAK8 710 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ICE2Q659A1 982 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ZNF549Q6P9A3 640 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 IGFL2Q6UWQ7 119 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 NEK10Q6ZWH5 1172 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 PAQR7Q86WK9 346 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ZADH2Q8N4Q0 377 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 FBXO15Q8NCQ5 510 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 STT3BQ8TCJ2 826 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 PPP4R1Q8TF05 950 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ZNF480Q8WV37 535 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 MAGOHBQ96A72 148 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 CABS1Q96KC9 395 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 PKP4Q99569 1192 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 WDR77Q9BQA1 342 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 CRB3Q9BUF7 120 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ZNF304Q9HCX3 659 aa12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 MRPS30Q9NP92 439 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 FBXO6Q9NRD1 293 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 CUEDC1Q9NWM3 386 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 ZNF282Q9UDV7 671 aaPredicted RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 NOVA2Q9UNW9 492 aaKnown RBP12.4□□□□□ -0.42
HMGCS1-205ENST00000508319 SVILO95425 2214 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 MAGEB16A2A368 324 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 CTAGE9A4FU28 777 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 VPS26AO75436 327 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 ZGLP1P0C6A0 271 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 FBLP22087 321 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 HSD17B2P37059 387 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 EMP3P54852 163 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 OCA2Q04671 838 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 PRDX1Q06830 199 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 TSTA3Q13630 321 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 HKDC1Q2TB90 917 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 TTLL9Q3SXZ7 439 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 CCDC137Q6PK04 289 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 PRSS58Q8IYP2 241 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 ARHGEF39Q8N4T4 335 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 CSNK1A1LQ8N752 337 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 PPFIBP2Q8ND30 876 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 CD200R1Q8TD46 325 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 ASB11Q8WXH4 323 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 OR2A5Q96R48 311 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 LHPPQ9H008 270 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 KLHL42Q9P2K6 505 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 PLEKHB1Q9UF11 243 aaPredicted RBP12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 C3orf18Q9UK00 162 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 RUVBL1Q9Y265 456 aaKnown RBP12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 JRKLQ9Y4A0 524 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 CRYBG3Q68DQ2 2970 aa12.39□□□□□ -0.43
HMGCS1-205ENST00000508319 CPAMD8Q8IZJ3 1885 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 ZNF839A8K0R7 811 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 E7ENX8 843 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 GFYI3L273 518 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 PGRMC1O00264 195 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 CCNDBP1O95273 360 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 HPP00738 406 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 ENO3P13929 434 aaPredicted RBP12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 ACPPP15309 386 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 EZRP15311 586 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 CARSP49589 748 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 MPP1Q00013 466 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 TAP2Q03519 686 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 THOC5Q13769 683 aaKnown RBP12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 DSG2Q14126 1118 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 LONRF1Q17RB8 773 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 VWA2Q5GFL6 755 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 AGAP7PQ5VUJ5 663 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 IRAK1BP1Q5VVH5 260 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 PARP9Q8IXQ6 854 aa12.38□□□□□ -0.43
HMGCS1-205ENST00000508319 LRRC56Q8IYG6 542 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms