RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 CCT8L1PA6NM43 557 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ZNF785A8K8V0 405 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 H0YAE9 185 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 MBTPS2O43462 519 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 SPAG7O75391 227 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RPP40O75818 363 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 BCAS2O75934 225 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 JAK1P23458 1154 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 HOXD9P28356 352 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PGM1P36871 562 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ELK3P41970 407 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PTDSS1P48651 473 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RPS3AP61247 264 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RPP30P78346 268 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 CDH17Q12864 832 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 CDH18Q13634 790 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ZNF235Q14590 738 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 FSCBQ5H9T9 825 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 EEF1AKMT2Q5JPI9 291 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PRAMEF14Q5SWL7 426 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RARS2Q5T160 578 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 FCRLBQ6BAA4 426 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RFWD3Q6PCD5 774 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 IYDQ6PHW0 289 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 MTSS1LQ765P7 747 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 RAB11FIP2Q7L804 512 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 NLRP9Q7RTR0 991 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ADGRG6Q86SQ4 1221 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 NUDT13Q86X67 352 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 DCP2Q8IU60 420 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ARID3BQ8IVW6 561 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 MFN1Q8IWA4 741 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 BBS7Q8IWZ6 715 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 METTL6Q8TCB7 284 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 BPIFB1Q8TDL5 484 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ELSPBP1Q96BH3 223 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ALG14Q96F25 216 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PAFAH2Q99487 392 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 MGME1Q9BQP7 344 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 S1PR5Q9H228 398 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 PLEKHA2Q9HB19 425 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 ABCB8Q9NUT2 735 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 BFARQ9NZS9 450 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 CAB39Q9Y376 341 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 USP15Q9Y4E8 981 aaPredicted RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 CAPN7Q9Y6W3 813 aa6.94□□□□□ -1.3
CLCN3-206ENST00000507875 MYO18AQ92614 2054 aaKnown RBP6.94□□□□□ -1.3
CLCN3-206ENST00000507875 A0A1W2PPM1 405 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TYROBPO43914 113 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TSPAN3O60637 253 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TBX10O75333 385 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ECI2O75521 394 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TRIM16O95361 564 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 GLP2RO95838 553 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 APRTP07741 180 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ANXA6P08133 673 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 PSMB4P28070 264 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 GCH1P30793 250 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 EIF2DP41214 584 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 MSH2P43246 934 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 NRG3P56975 720 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 RPL26P61254 145 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 RPS24P62847 133 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 CSNK2BP67870 215 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 EFTUD2Q15029 972 aaKnown RBP eCLIP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SPANXN3Q5MJ09 141 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 STEAP4Q687X5 459 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TFAP2DQ7Z6R9 452 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SPATA24Q86W54 205 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 IGDCC3Q8IVU1 814 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 NPAS3Q8IXF0 933 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 C4orf33Q8N1A6 199 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SMRP1Q8NCR6 262 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ATP2A3Q93084 1043 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 WBP2Q969T9 261 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 FAM120BQ96EK7 910 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 FEM1CQ96JP0 617 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ARL5BQ96KC2 179 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 LMLNQ96KR4 655 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 NUDCD1Q96RS6 583 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SIKE1Q9BRV8 207 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 FEM1AQ9BSK4 669 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 CINPQ9BW66 212 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 IL22Q9GZX6 179 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 C8orf33Q9H7E9 229 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TM9SF3Q9HD45 589 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 DECR2Q9NUI1 292 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 POLR3BQ9NW08 1133 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 RPL26L1Q9UNX3 145 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 CHMP2BQ9UQN3 213 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 SLC27A6Q9Y2P4 619 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ZNF106Q9H2Y7 1883 aaKnown RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TTC28Q96AY4 2481 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 TCRBV9S1A1TA0A576 114 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.93□□□□□ -1.3
CLCN3-206ENST00000507875 KCNK1O00180 336 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ADAM20O43506 726 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 AVILO75366 819 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 ZMPSTE24O75844 475 aa6.93□□□□□ -1.3
CLCN3-206ENST00000507875 GSRP00390 522 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms