RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 C2CD2Q9Y426 696 aa3.67□□□□□ -1.82
HMGB1P28-201ENST00000507778 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 A0A0U1RQK1 487 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 ZNF320A2RRD8 509 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 A4D1N5 150 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 PMS2P5A8MQ11 134 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 BLOC1S5-TXNDC5H3BN57 136 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 ZNF197O14709 1029 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 EPHB6O15197 1021 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SELENOFO60613 162 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 CLPTM1O96005 669 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SERPING1P05155 500 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 UMODP07911 640 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 GP1BBP13224 206 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 DARSP14868 501 aaKnown RBP3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 ALDH4A1P30038 563 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 NKX2-1P43699 371 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 KCNJ1P48048 391 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 NFE2L1Q14494 772 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SLC25A53Q5H9E4 307 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 LCN1P1Q5VSP4 162 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SUSD4Q5VX71 490 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 GBP6Q6ZN66 633 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 C15orf39Q6ZRI6 1047 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 LINC00696Q6ZRV3 163 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SH2D5Q6ZV89 423 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 IL17RELQ6ZVW7 336 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 G2E3Q7L622 706 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 APCDD1Q8J025 514 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 MARVELD2Q8N4S9 558 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 CNBD1Q8NA66 436 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 HPSE2Q8WWQ2 592 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 TSACCQ96A04 125 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 GIMAP5Q96F15 307 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 AK8Q96MA6 479 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 GDAP1L1Q96MZ0 367 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 PITPNM3Q9BZ71 974 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SHARPINQ9H0F6 387 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SDCBP2Q9H190 292 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 C2orf40Q9H1Z8 148 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 PPANQ9NQ55 473 aaKnown RBP3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 SEPT10Q9P0V9 454 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 C19orf25Q9UFG5 118 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 LEF1Q9UJU2 399 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 MAN1B1Q9UKM7 699 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 GRID1Q9ULK0 1009 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 TCF19Q9Y242 345 aa3.66□□□□□ -1.82
HMGB1P28-201ENST00000507778 KRTAP29-1A8MX34 341 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 KLF11O14901 512 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 GLRA3O75311 464 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 EML2O95834 649 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 PLGP00747 810 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 LHCGRP22888 699 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 CDKN1AP38936 164 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 CETN2P41208 172 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 OPCMLQ14982 345 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 TYSND1Q2T9J0 566 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 GTDC1Q4AE62 458 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 ARHGEF16Q5VV41 709 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 FAM166AQ6J272 317 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 ANKRD33Q7Z3H0 272 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 PIWIL3Q7Z3Z3 882 aaKnown RBP3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 CCDC91Q7Z6B0 441 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 TUSC5Q8IXB3 177 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 KIRREL3Q8IZU9 778 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 CCDC63Q8NA47 563 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 UXS1Q8NBZ7 420 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 TRIM58Q8NG06 486 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 OR4C3Q8NH37 302 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 NCOA7Q8NI08 942 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 CTCFLQ8NI51 663 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 AFAP1L1Q8TED9 768 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 SUSD6Q92537 303 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 UTP14AQ9BVJ6 771 aaKnown RBP3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 CDK19Q9BWU1 502 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 DNAI2Q9GZS0 605 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 RIMS4Q9H426 269 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 TMEM206Q9H813 350 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 SLC52A3Q9NQ40 469 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 LIPT1Q9Y234 373 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 R4GN57 208 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 TRIP12Q14669 1992 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 IL16Q14005 1332 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 IGSF1Q8N6C5 1336 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 STK36Q9NRP7 1315 aa3.65□□□□□ -1.83
HMGB1P28-201ENST00000507778 TMEM150CB9EJG8 249 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 F8VVB4 439 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 F8VWA3 439 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 ST8SIA3O43173 380 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 TRMUO75648 421 aaKnown RBP3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 CDK2AP2O75956 126 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 MOCS2O96007 188 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 ANKRD34CP0C6C1 535 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 PRSS56P0CW18 603 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 HOXB6P17509 224 aaKnown RBP3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 SFTPDP35247 375 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 MAGEA11P43364 429 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 IL10RBQ08334 325 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 SLMAPQ14BN4 828 aa3.64□□□□□ -1.83
HMGB1P28-201ENST00000507778 XKR6Q5GH73 641 aa3.64□□□□□ -1.83
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