RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 FFAR3O14843 346 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 GPR42O15529 346 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 CD72P21854 359 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 C10orf62Q5T681 223 aaPredicted RBP16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 DOK6Q6PKX4 331 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 ANKRD46Q86W74 232 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 RGL4Q8IZJ4 473 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 SLC39A13Q96H72 371 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 KCNC2Q96PR1 638 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 SMURF1Q9HCE7 757 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 DYRK4Q9NR20 520 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 OLA1Q9NTK5 396 aaKnown RBP16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 A0A0X1KG70 313 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 ZSCAN5BA6NJL1 495 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 MEIS3P2A8K0S8 358 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 B3GALT4O96024 378 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 IFNA8P32881 189 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 SERINC3Q13530 473 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 EIF4HQ15056 248 aaKnown RBP16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 BAK1Q16611 211 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 MS4A13Q5J8X5 152 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 GALNT10Q86SR1 603 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 ATCAYQ86WG3 371 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 SIX5Q8N196 739 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 DNAJB3Q8WWF6 145 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 HSH2DQ96JZ2 352 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 PKMYT1Q99640 499 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 EPYCQ99645 322 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 ACBD6Q9BR61 282 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 GIMAP4Q9NUV9 329 aa16.6■□□□□ 0.25
SQSTM1-211ENST00000506690 IGLV3-10A0A075B6K4 115 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 FFAR2O15552 330 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ULK1O75385 1050 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 PKLRP30613 574 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 S100A3P33764 101 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 KDELR2P33947 212 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TTPAP49638 278 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 CLCN4P51793 760 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 NUDT6P53370 316 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TEKQ02763 1124 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TAF1AQ15573 450 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 NFE2Q16621 373 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TIMM50Q3ZCQ8 353 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 GNASQ5JWF2 1037 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 KIAA1841Q6NSI8 718 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 CBLL1Q75N03 491 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 EIF3MQ7L2H7 374 aaKnown RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ZNF367Q7RTV3 350 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ADAMTSL2Q86TH1 951 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 BPHLQ86WA6 291 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 SLC38A6Q8IZM9 456 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 STX19Q8N4C7 294 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 MDGA1Q8NFP4 955 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 DHRS9Q9BPW9 319 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 KATNBL1Q9H079 304 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 MIOSQ9NXC5 875 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ZNF490Q9ULM2 529 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 SATB2Q9UPW6 733 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TLR6Q9Y2C9 796 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TTC3P53804 2025 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 MBLAC1A4D2B0 266 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 E5RI56 91 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 GFRA2O00451 464 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TAPBPO15533 448 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 WDR47O94967 919 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 MYCP01106 439 aaPredicted RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 HSMCR30P0CW71 290 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 GABRB1P18505 474 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 HTR2BP41595 481 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 HSPA7P48741 367 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 CLCN7P51798 805 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 AFF1P51825 1210 aaKnown RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 CLDN8P56748 225 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ST3GAL4Q11206 333 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ZNF79Q15937 498 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 VMACQ2NL98 169 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TIGD5Q53EQ6 642 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ZMAT1Q5H9K5 638 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TRAF7Q6Q0C0 670 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 GLT6D1Q7Z4J2 308 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 ASB15Q8WXK1 588 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 NSUN3Q9H649 340 aaKnown RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 SARS2Q9NP81 518 aaKnown RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 RAD18Q9NS91 495 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 STMN3Q9NZ72 180 aa16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 NUFIP1Q9UHK0 495 aaKnown RBP16.59■□□□□ 0.25
SQSTM1-211ENST00000506690 TNFRSF10BO14763 440 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 CYP7B1O75881 506 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 ESR1P03372 595 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 RPS14P62263 151 aaKnown RBP16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 CYP4F2P78329 520 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 HYAL2Q12891 473 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 ZNF235Q14590 738 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 ALG1LQ6GMV1 187 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 TWF2Q6IBS0 349 aaKnown RBP16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 OR4F3Q6IEY1 312 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 LRRTM3Q86VH5 581 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 RNF130Q86XS8 419 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 LIX1LQ8IVB5 337 aa16.58■□□□□ 0.25
SQSTM1-211ENST00000506690 ZZZ3Q8IYH5 903 aa16.58■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms