RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 IDSB3KWA1 339 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 H0YGG7 62 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 E2F3O00716 465 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 KLHL18O94889 574 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CRYABP02511 175 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 ESR1P03372 595 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CATP04040 527 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 PRR35P0CG20 571 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 PAMP19021 973 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CHRM3P20309 590 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 TNFRSF8P28908 595 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 BDKRB1P46663 353 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 ARF3P61204 181 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 SARNPP82979 210 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CDK16Q00536 496 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 RELAQ04206 551 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 RBPJQ06330 500 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 SNX1Q13596 522 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CCNG2Q16589 344 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 NDUFA9Q16795 377 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 LONRF1Q17RB8 773 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 PRTGQ2VWP7 1150 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 C1QL3Q5VWW1 255 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 ARMC3Q5W041 872 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 SP5Q6BEB4 398 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 FRMPD2BQ6IN97 320 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CSNK1A1LQ8N752 337 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CATSPER1Q8NEC5 780 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 DNAJB8Q8NHS0 232 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 C1orf54Q8WWF1 131 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 RELTQ969Z4 430 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 MARVELD3Q96A59 401 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 EBNA1BP2Q99848 306 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 SLX1AQ9BQ83 275 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 PLCD4Q9BRC7 762 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 TRIM56Q9BRZ2 755 aaKnown RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 MKKSQ9NPJ1 570 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 TREX1Q9NSU2 369 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 PTGFRNQ9P2B2 879 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 MARCH4Q9P2E8 410 aaPredicted RBP10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 COPG2Q9UBF2 871 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 ZKSCAN5Q9Y2L8 839 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 NFS1Q9Y697 457 aa10.59□□□□□ -0.71
UBE2D3-219ENST00000505207 LOC105369274A0A096LPK9 316 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 LOC102723532A0A0G2JNH3 316 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 GOLGA6L6A8MZA4 724 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 E5RI56 91 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 ZG16O60844 167 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 VAPBO95292 243 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 MATN4O95460 622 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 PSMB5P28074 263 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 FMO4P31512 558 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 RPL22P35268 128 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 TNFSF10P50591 281 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 CASP6P55212 293 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 ADARP55265 1226 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 ABATP80404 500 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 BASP1P80723 227 aaKnown RBP10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 Q0VFX4 171 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 ART3Q13508 389 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 TSTA3Q13630 321 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 RPS6KA1Q15418 735 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 TTLL9Q3SXZ7 439 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 VWA2Q5GFL6 755 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 ABHD17BQ5VST6 288 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 FBXO42Q6P3S6 717 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 TMEM207Q6UWW9 146 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 FJX1Q86VR8 437 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 TMEM151BQ8IW70 566 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 OR4N4Q8N0Y3 316 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 METTL21AQ8WXB1 218 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 C8orf44Q96CB5 159 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 MMABQ96EY8 250 aaPredicted RBP10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 KIFC1Q9BW19 673 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 ACAT2Q9BWD1 397 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 TGIF2Q9GZN2 237 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 HOMER3Q9NSC5 361 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 CELSR2Q9HCU4 2923 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 SVILO95425 2214 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 PCM1Q15154 2024 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 DOCK10Q96BY6 2186 aa10.58□□□□□ -0.72
UBE2D3-219ENST00000505207 SNRNP200O75643 2136 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 A0A1W2PQ72 361 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 ARHGAP10A1A4S6 786 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 PRSS44E7EML9 344 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 RASAL1O95294 804 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 MLYCDO95822 493 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 CYC1P08574 325 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 COX6A1P12074 109 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 ETS1P14921 441 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 EZRP15311 586 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 HRH2P25021 359 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 ELAVL4P26378 380 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 NMBRP28336 390 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 SLC26A3P40879 764 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 AVPR1BP47901 424 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 PRDX1Q06830 199 aaKnown RBP10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 FAM53BQ14153 422 aa10.57□□□□□ -0.72
UBE2D3-219ENST00000505207 CCSMST1Q4G0I0 132 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms