RNA–Protein interactions for RNA: ENST00000504807.5

DDX41-204, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 794 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-204ENST00000504807 RPN2P04844 631 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 HOXB4P17483 251 aaPredicted RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 CHRM3P20309 590 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 VARSP26640 1264 aaKnown RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 GABRB3P28472 473 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 ATP5DP30049 168 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 PPARGP37231 505 aaPredicted RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 ELOAQ14241 798 aaKnown RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 CRB2Q5IJ48 1285 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 RNASEH2BQ5TBB1 312 aaKnown RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 CASC4Q6P4E1 433 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 KIRREL2Q6UWL6 708 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 PIWIL4Q7Z3Z4 852 aaKnown RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 LAPTM4BQ86VI4 370 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 PAQR7Q86WK9 346 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 RAB43Q86YS6 212 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 IGDCC3Q8IVU1 814 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 GALNT16Q8N428 558 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 MCUQ8NE86 351 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 CD200R1Q8TD46 325 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 SLC22A18Q96BI1 424 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 PTERQ96BW5 349 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 OSBPL9Q96SU4 736 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 TCF12Q99081 682 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 DPH7Q9BTV6 452 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 GPN3Q9UHW5 284 aaPredicted RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 FBXL4Q9UKA2 621 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 SH2B3Q9UQQ2 575 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 NTNG1Q9Y2I2 539 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 PADI2Q9Y2J8 665 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 MRPS2Q9Y399 296 aaKnown RBP12.54□□□□□ -0.4
DDX41-204ENST00000504807 JRKLQ9Y4A0 524 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 ZNF451Q9Y4E5 1061 aa12.54□□□□□ -0.4
DDX41-204ENST00000504807 SEC16AO15027 2179 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 HYKKA2RU49 373 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 TARM1B6A8C7 271 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 AP3B1O00203 1094 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 FANCGO15287 622 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 USP1O94782 785 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 HAUS5O94927 633 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 SLC16A8O95907 504 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 TESK1Q15569 626 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 HKDC1Q2TB90 917 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 PRTGQ2VWP7 1150 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 ZNF425Q6IV72 752 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 GDF7Q7Z4P5 450 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 SDCCAG8Q86SQ7 713 aaPredicted RBP12.53□□□□□ -0.4
DDX41-204ENST00000504807 PLD3Q8IV08 490 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 CPNE9Q8IYJ1 553 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 OR9A1PQ8NGU1 263 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 ZNF480Q8WV37 535 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 FKBP10Q96AY3 582 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 SNRNP40Q96DI7 357 aaKnown RBP12.53□□□□□ -0.4
DDX41-204ENST00000504807 NDNQ99608 321 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 SLC26A1Q9H2B4 701 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 HOMER3Q9NSC5 361 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 ASF1BQ9NVP2 202 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 SPATA7Q9P0W8 599 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 ZC3H7BQ9UGR2 993 aaKnown RBP12.53□□□□□ -0.4
DDX41-204ENST00000504807 TAC3Q9UHF0 121 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 ADAMTS6Q9UKP5 1117 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 DCHS2Q6V1P9 2916 aa12.53□□□□□ -0.4
DDX41-204ENST00000504807 SDR42E2A6NKP2 422 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 F8W8V4 182 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 H0YGG7 62 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 AGPSO00116 658 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 PGRMC1O00264 195 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 KPNA5O15131 536 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 KDM1AO60341 852 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 PHF2O75151 1096 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 EIF2S1P05198 315 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 MLNP12872 115 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 IVDP26440 423 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 CCNFP41002 786 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 ARF3P61204 181 aaPredicted RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 GRM7Q14831 915 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 MYBPC3Q14896 1274 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 ZRSR2Q15696 482 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 VWA2Q5GFL6 755 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 ZC3H12BQ5HYM0 836 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 RBM20Q5T481 1227 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 VWA5B1Q5TIE3 1220 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 MBOAT1Q6ZNC8 495 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 PRSS58Q8IYP2 241 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 ASB11Q8WXH4 323 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 ZUFSPQ96AP4 578 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 C8orf44Q96CB5 159 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 PBKQ96KB5 322 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 OR2A5Q96R48 311 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 GPR21Q99679 349 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 PLCD4Q9BRC7 762 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 RAB11FIP5Q9BXF6 653 aa12.52□□□□□ -0.41
DDX41-204ENST00000504807 C20orf96Q9NUD7 363 aaPredicted RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 INTS10Q9NVR2 710 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 TRMT1Q9NXH9 659 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 RUVBL1Q9Y265 456 aaKnown RBP12.52□□□□□ -0.41
DDX41-204ENST00000504807 E7ENX8 843 aa12.51□□□□□ -0.41
DDX41-204ENST00000504807 HAT1O14929 419 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms