RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 KLHL20Q9Y2M5 609 aa4.75□□□□□ -1.65
LMNB1-208ENST00000504788 CHD8Q9HCK8 2581 aa4.75□□□□□ -1.65
LMNB1-208ENST00000504788 ATMQ13315 3056 aa4.75□□□□□ -1.65
LMNB1-208ENST00000504788 MGAQ8IWI9 3026 aa4.75□□□□□ -1.65
LMNB1-208ENST00000504788 NCF1BA6NI72 391 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SLC9B1P1A6NJY1 282 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 NCF1CA8MVU1 366 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 C4orf51C9J302 202 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 E7EQ34 232 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 K7EPI3 171 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 MATN2O00339 956 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 COPEO14579 308 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TM9SF1O15321 606 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 DUX1O43812 170 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 STK16O75716 305 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 FKBP9O95302 570 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 MED26O95402 600 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TIAF1O95411 115 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 BPGMP07738 259 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CDK4P11802 303 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 NCF1P14598 390 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 NELFEP18615 380 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 MPSTP25325 297 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ALDH3A1P30838 453 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ETV5P41161 510 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CCR10P46092 362 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SH3BP2P78314 561 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 E2F1Q01094 437 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PLCL1Q15111 1095 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TBCCQ15814 346 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 AMZ1Q400G9 498 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF385CQ66K41 422 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 FRMPD2BQ6IN97 320 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 IGF2-ASQ6U949 168 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 LRRC70Q7Z2Q7 622 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TAX1BP1Q86VP1 789 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 THOC6Q86W42 341 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 OOSP2Q86WS3 158 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PLXDC1Q8IUK5 500 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 C10orf107Q8IVU9 208 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TRIM48Q8IWZ4 208 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TCAIMQ8N3R3 496 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PTGR2Q8N8N7 351 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 L3MBTL4Q8NA19 623 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 RCBTB1Q8NDN9 531 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ARMC2Q8NEN0 867 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 OR10G6Q8NH81 332 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 WDR48Q8TAF3 677 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 RDH11Q8TC12 318 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SKA2Q8WVK7 121 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 NCSTNQ92542 709 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ZUFSPQ96AP4 578 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF501Q96CX3 271 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 C11orf24Q96F05 449 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 LIN37Q96GY3 246 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PKNOX2Q96KN3 472 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CCDC74BQ96LY2 380 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 GFM1Q96RP9 751 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SORT1Q99523 831 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 PLCD4Q9BRC7 762 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 DPH7Q9BTV6 452 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 NTMT1Q9BV86 223 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ACAT2Q9BWD1 397 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 GATA5Q9BWX5 397 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 EHD1Q9H4M9 534 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SLC32A1Q9H598 525 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ZNF395Q9H8N7 513 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CCDC177Q9NQR7 707 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 OCIAD1Q9NX40 245 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 HAO1Q9UJM8 370 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 RNF112Q9ULX5 631 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 TSC22D4Q9Y3Q8 395 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SCN3AQ9NY46 2000 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 LOC105369274A0A096LPK9 316 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 LOC102723532A0A0G2JNH3 316 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 A0A0J9YY10 115 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SYCE1LA8MT33 242 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 C2orf74A8MZ97 194 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 H7BY64 318 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 HGSO14964 777 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 P2RX6O15547 441 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SNNO75324 88 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ZBTB11O95625 1053 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 MT-CO3P00414 261 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 HIST1H2AGP0C0S8 130 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CCL4P13236 92 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CPA3P15088 417 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 FOLR1P15328 257 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 HIST1H2ADP20671 130 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ITGAXP20702 1163 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CCND1P24385 295 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ATP5F1P24539 256 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 MAP4P27816 1152 aaKnown RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 SERPINB4P48594 390 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CDH13P55290 713 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 FOXA1P55317 472 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ERVPABLB-1P60509 514 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 ABATP80404 500 aa4.74□□□□□ -1.65
LMNB1-208ENST00000504788 GALNT1Q10472 559 aaPredicted RBP4.74□□□□□ -1.65
LMNB1-208ENST00000504788 CDC16Q13042 620 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms