RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 CENPNQ96H22 339 aaPredicted RBP13.68□□□□□ -0.22
TCOF1-207ENST00000504761 C17orf62Q9BQA9 187 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 LZTS1Q9Y250 596 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 RTCAO00442 366 aaKnown RBP13.68□□□□□ -0.22
TCOF1-207ENST00000504761 PDPK1O15530 556 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 PRKD3O94806 890 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 AAK1Q2M2I8 961 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 ARMC8Q8IUR7 673 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 CAMKK1Q8N5S9 505 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 RNF31Q96EP0 1072 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 RBM18Q96H35 190 aaKnown RBP13.68□□□□□ -0.22
TCOF1-207ENST00000504761 TRAPPC9Q96Q05 1148 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 CNPPD1Q9BV87 410 aa13.68□□□□□ -0.22
TCOF1-207ENST00000504761 ERN1O75460 977 aaKnown RBP13.67□□□□□ -0.22
TCOF1-207ENST00000504761 DIRAS1O95057 198 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 SCELO95171 688 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 GJA4P35212 333 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 TMEM31Q5JXX7 168 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 EGFLAMQ63HQ2 1017 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 LETMD1Q6P1Q0 360 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 ERICH5Q6P6B1 374 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 ZNF540Q8NDQ6 660 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 SLC17A9Q9BYT1 436 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 GSTO2Q9H4Y5 243 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 FARSBQ9NSD9 589 aaKnown RBP13.67□□□□□ -0.22
TCOF1-207ENST00000504761 EXD2Q9NVH0 621 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 ARFGEF1Q9Y6D6 1849 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 PIPSLA2A3N6 862 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 ETS2P15036 469 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 HOXC8P31273 242 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 TRPC1P48995 793 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 NCBP2P52298 156 aaKnown RBP eCLIP13.67□□□□□ -0.221e-8■■□□□ 13.6
TCOF1-207ENST00000504761 CDH12P55289 794 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 IER5LQ5T953 404 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 GPR150Q8NGU9 434 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 CDV3Q9UKY7 258 aaKnown RBP13.67□□□□□ -0.22
TCOF1-207ENST00000504761 LOXHD1Q8IVV2 1947 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 HMX2A2RU54 273 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 PDE9AO76083 593 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 PTX3P26022 381 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-207ENST00000504761 RPS9P46781 194 aaKnown RBP13.67□□□□□ -0.22
TCOF1-207ENST00000504761 SP140Q13342 867 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 DPY19L1Q2PZI1 675 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 SLC44A4Q53GD3 710 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 PRRT3Q5FWE3 981 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 C9orf50Q5SZB4 431 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 NOXRED1Q6NXP6 359 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 CD300LGQ6UXG3 332 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 ZBED6CLQ96FA7 236 aaPredicted RBP13.67□□□□□ -0.22
TCOF1-207ENST00000504761 FZD4Q9ULV1 537 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 HEBP2Q9Y5Z4 205 aa13.67□□□□□ -0.22
TCOF1-207ENST00000504761 OAS3Q9Y6K5 1087 aaKnown RBP13.67□□□□□ -0.22
TCOF1-207ENST00000504761 ZNF860A6NHJ4 632 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 TNFP01375 233 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 BCKDHAP12694 445 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 PAICSP22234 425 aaKnown RBP13.66□□□□□ -0.22
TCOF1-207ENST00000504761 CCR7P32248 378 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 BTN3A2P78410 334 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 EPS8Q12929 822 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 SLC13A2Q13183 592 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 ADGRE1Q14246 886 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 FAM180BQ6P0A1 224 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 SLC35A5Q9BS91 424 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 CPED1A4D0V7 1026 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 MROH6A6NGR9 719 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 A8MU76 341 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 EI24O14681 340 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 FABP3P05413 133 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 FOXM1Q08050 763 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 POMZP3Q6PJE2 187 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 RNF44Q7L0R7 432 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 KBTBD6Q86V97 674 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 TRIM69Q86WT6 500 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 NPAS3Q8IXF0 933 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 RGMAQ96B86 450 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 SLC45A3Q96JT2 553 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 RAB11FIP5Q9BXF6 653 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 PRRG3Q9BZD7 231 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 C1orf21Q9H246 121 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 KCNK13Q9HB14 408 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 HEBP1Q9NRV9 189 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 OAZ3Q9UMX2 235 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 LOC100506127A0A0U1RQW1 187 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 DFNA5O60443 496 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 PBX2P40425 430 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 TAS2R41P59536 307 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 SPIN4Q56A73 249 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 DUS1LQ6P1R4 473 aaKnown RBP13.66□□□□□ -0.22
TCOF1-207ENST00000504761 CHRDL2Q6WN34 429 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 CNTN4Q8IWV2 1026 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 SFRP1Q8N474 314 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 DNASE1L2Q92874 299 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 CMTM7Q96FZ5 175 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 KLHDC7BQ96G42 594 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 SLC30A3Q99726 388 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 PKP2Q99959 881 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 MEAF6Q9HAF1 191 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 KRT87PA6NCN2 255 aa13.66□□□□□ -0.22
TCOF1-207ENST00000504761 IMPDH2P12268 514 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms