RNA–Protein interactions for RNA: ENST00000504643.5

MATR3-210, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 2,560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-210ENST00000504643 ZBTB20Q9HC78 741 aaPredicted RBP7.41□□□□□ -1.22
MATR3-210ENST00000504643 ZNF160Q9HCG1 818 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 CHST11Q9NPF2 352 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 ABI3Q9P2A4 366 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 TRPC4Q9UBN4 977 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 CTSFQ9UBX1 484 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 PACSIN2Q9UNF0 486 aaPredicted RBP7.41□□□□□ -1.22
MATR3-210ENST00000504643 KLHL20Q9Y2M5 609 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 PCDHGB6Q9Y5F9 930 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 ICE1Q9Y2F5 2266 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 USP9XQ93008 2570 aaPredicted RBP7.41□□□□□ -1.22
MATR3-210ENST00000504643 LOC102723996A0A087X1L8 192 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 H0YIG0 161 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 MYO1CO00159 1063 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 ZBTB14O43829 449 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 PSIP1O75475 530 aaKnown RBP7.41□□□□□ -1.22
MATR3-210ENST00000504643 CTSBP07858 339 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 PRR35P0CG20 571 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 IL10P22301 178 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 MCM3P25205 808 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 RPL22P35268 128 aaKnown RBP7.41□□□□□ -1.22
MATR3-210ENST00000504643 SOX11P35716 441 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 SLC26A3P40879 764 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 TNFSF10P50591 281 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 SESN2P58004 480 aaPredicted RBP7.41□□□□□ -1.22
MATR3-210ENST00000504643 GBX1Q14549 363 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 SEMA3AQ14563 771 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 TYSND1Q2T9J0 566 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 ABHD17BQ5VST6 288 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 SP5Q6BEB4 398 aaPredicted RBP7.41□□□□□ -1.22
MATR3-210ENST00000504643 ZNF787Q6DD87 383 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 RPTNQ6XPR3 784 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 LINC00696Q6ZRV3 163 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 TAX1BP1Q86VP1 789 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 CSNK1A1LQ8N752 337 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 CALML6Q8TD86 181 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 ATG4AQ8WYN0 398 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 YIPF2Q9BWQ6 316 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 ZNF700Q9H0M5 742 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 COPG2Q9UBF2 871 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 NTNG1Q9Y2I2 539 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 MAU2Q9Y6X3 613 aa7.41□□□□□ -1.22
MATR3-210ENST00000504643 SPTBP11277 2137 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 TCRBV7S2A1N4TA0A589 114 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 IDSB3KWA1 339 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 H0YGG7 62 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 KIF5CO60282 957 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 VAPBO95292 243 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 RASAL1O95294 804 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 MPC1LP0DKB6 136 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 CDC25BP30305 580 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 FMO4P31512 558 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 GRIA1P42261 906 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 PNLIPRP1P54315 467 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 ARF3P61204 181 aaPredicted RBP7.4□□□□□ -1.22
MATR3-210ENST00000504643 SKP1P63208 163 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 BASP1P80723 227 aaKnown RBP7.4□□□□□ -1.22
MATR3-210ENST00000504643 HIST2H2BCQ6DN03 193 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 KIAA0930Q6ICG6 404 aaPredicted RBP7.4□□□□□ -1.22
MATR3-210ENST00000504643 FRMPD2BQ6IN97 320 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 UGT3A1Q6NUS8 523 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 FAM20CQ8IXL6 584 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 HORMAD2Q8N7B1 307 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 C1orf54Q8WWF1 131 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 NR4A3Q92570 626 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 ZNF354BQ96LW1 612 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 MAGEB10Q96LZ2 347 aaPredicted RBP7.4□□□□□ -1.22
MATR3-210ENST00000504643 BIRC8Q96P09 236 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 DRC3Q9H069 523 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.4□□□□□ -1.221e-10■■■□□ 16.6
MATR3-210ENST00000504643 TMEM184CQ9NVA4 438 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 SAMD15Q9P1V8 674 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 SOX13Q9UN79 622 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 PIKFYVEQ9Y2I7 2098 aa7.4□□□□□ -1.22
MATR3-210ENST00000504643 KCNE1BA0A087WTH5 132 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 LOC105369274A0A096LPK9 316 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 IGHV1-45A0A0A0MS14 117 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 LOC102723532A0A0G2JNH3 316 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 A0A1W2PPV9 198 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 E2F3O00716 465 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 KLHL18O94889 574 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 RNF224P0DH78 156 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 ATXN8OSP0DMR3 200 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 COX6A1P12074 109 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 MLNP12872 115 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 AGAP20933 346 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 ELAVL4P26378 380 aaKnown RBP7.4□□□□□ -1.23
MATR3-210ENST00000504643 PTGER4P35408 488 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 AGTR2P50052 363 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 MEF2AQ02078 507 aaPredicted RBP7.4□□□□□ -1.23
MATR3-210ENST00000504643 SNX1Q13596 522 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 PTK6Q13882 451 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 KRTCAP3Q53RY4 240 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 C1QL3Q5VWW1 255 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 ICE2Q659A1 982 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 ZNF324BQ6AW86 544 aaPredicted RBP7.4□□□□□ -1.23
MATR3-210ENST00000504643 XKRXQ6PP77 449 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 TMEM205Q6UW68 189 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 TMEM207Q6UWW9 146 aa7.4□□□□□ -1.23
MATR3-210ENST00000504643 PCGF5Q86SE9 256 aa7.4□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms