RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 STIM1Q13586 685 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 PDIA5Q14554 519 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TTC23Q5W5X9 447 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ASPHD2Q6ICH7 369 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TMEM53Q6P2H8 277 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TRMT10CQ7L0Y3 403 aaKnown RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SPRED2Q7Z698 418 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 VSTM4Q8IW00 320 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF514Q96K75 400 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 FAM71F1Q96KD3 344 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TMEM68Q96MH6 324 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SEMA4CQ9C0C4 833 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 HHATLQ9HCP6 504 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 NKX1-2Q9UD57 310 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ERRFI1Q9UJM3 462 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CDC123O75794 336 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CDK14O94921 469 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 VSIG10L2P0DP72 767 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ACO1P21399 889 aaKnown RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 NLRP11P59045 1033 aaKnown RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 IL18Q14116 193 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 NONOQ15233 471 aaKnown RBP eCLIP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SGSM1Q2NKQ1 1148 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 PRSS36Q5K4E3 855 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 MLIPQ5VWP3 458 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SASS6Q6UVJ0 657 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 BTNL8Q6UX41 500 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ADGRE4PQ86SQ3 457 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TMEM173Q86WV6 379 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TMEM217Q8N7C4 229 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 OR4D6Q8NGJ1 314 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ATOH1Q92858 354 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TNFRSF14Q92956 283 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF668Q96K58 619 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CPNE1Q99829 537 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 C11orf84Q9BUA3 381 aaPredicted RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 OSBPL1AQ9BXW6 950 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 MMP27Q9H306 513 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 MRPL40Q9NQ50 206 aaKnown RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 HACD3Q9P035 362 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SH3GLB1Q9Y371 365 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 LRRC42Q9Y546 428 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 C13orf42A0A1B0GVH6 325 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 GOLGA8JA6NMD2 632 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 BECN2A8MW95 431 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 LSM1O15116 133 aaKnown RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CYP26A1O43174 497 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 BUD23O43709 281 aaKnown RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 RBBP9O75884 186 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 GOLGA8HP0CJ92 632 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SLC8A1P32418 973 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SLC7A2P52569 658 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 UBE2G2P60604 165 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 VBP1P61758 197 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 SELPLGQ14242 412 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CYP1B1Q16678 543 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 BMT2Q1RMZ1 405 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CMTM4Q8IZR5 234 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CADM3Q8N126 398 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 FAM81AQ8TBF8 368 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 DQX1Q8TE96 717 aaKnown RBP5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ZFYVE19Q96K21 471 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 TESK2Q96S53 571 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 CNPY3Q9BT09 278 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 COPS7AQ9UBW8 275 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 POFUT2Q9Y2G5 429 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 ARHGEF40Q8TER5 1519 aa5.02□□□□□ -1.61
NIPBL-204ENST00000504430 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 METTL21EPA6NDL7 271 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 HSPB2A8KAH6 182 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 SMLR1H3BR10 107 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 HIP1O00291 1037 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 NDUFAB1O14561 156 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 FPGTO14772 594 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 SERPINI2O75830 405 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 PNMTP11086 282 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 TGM2P21980 687 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 HOXD9P28356 352 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-204ENST00000504430 TPMTP51580 245 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 ATP12AP54707 1039 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 ATP5IP56385 69 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-204ENST00000504430 SIM1P81133 766 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-204ENST00000504430 RCAN2Q14206 197 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 FAM189A2Q15884 450 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 HSPB2Q16082 182 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 CARTPTQ16568 116 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 ZNF789Q5FWF6 425 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 CDKL4Q5MAI5 379 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 STXBP4Q6ZWJ1 553 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 PNPT1Q8TCS8 783 aaKnown RBP5.01□□□□□ -1.61
NIPBL-204ENST00000504430 SENP8Q96LD8 212 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 PRR25Q96S07 402 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 FRMD8Q9BZ67 464 aaPredicted RBP5.01□□□□□ -1.61
NIPBL-204ENST00000504430 EQTNQ9NQ60 294 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 ASAH2Q9NR71 780 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 SLCO1C1Q9NYB5 712 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 IL37Q9NZH6 218 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 ERVK-18Q9QC07 812 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 FAM96BQ9Y3D0 163 aa5.01□□□□□ -1.61
NIPBL-204ENST00000504430 RNF215Q9Y6U7 377 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms