RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 ABATP80404 500 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 RELAQ04206 551 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 EIF2S3LQ2VIR3 472 aaKnown RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 PLEKHN1Q494U1 663 aaPredicted RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 THEMIS2Q5TEJ8 643 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 FRMPD2BQ6IN97 320 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 ZNF549Q6P9A3 640 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 IGFL3Q6UXB1 125 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 CYHR1Q6ZMK1 362 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 PPP1R32Q7Z5V6 425 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 ZADH2Q8N4Q0 377 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 RBMXL3Q8N7X1 1067 aaKnown RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.42□□□□□ -0.58
MED28-203ENST00000503945 FBXO15Q8NCQ5 510 aaPredicted RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 MCOLN3Q8TDD5 553 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 ANP32BQ92688 251 aaKnown RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 RERGQ96A58 199 aaPredicted RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 GPR21Q99679 349 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 PLCD4Q9BRC7 762 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 FAM167BQ9BTA0 163 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 NAT9Q9BTE0 207 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 YIPF2Q9BWQ6 316 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 SEMA3GQ9NS98 782 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 IARS2Q9NSE4 1012 aaKnown RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 ABCF3Q9NUQ8 709 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 ZNF282Q9UDV7 671 aaPredicted RBP11.42□□□□□ -0.58
MED28-203ENST00000503945 ASIC3Q9UHC3 531 aa11.42□□□□□ -0.58
MED28-203ENST00000503945 MDC1Q14676 2089 aaKnown RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 OR2A25A4D2G3 310 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 VSTM2BA6NLU5 285 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 TCP11X1B4DZS4 312 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 E7ENX8 843 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 SLC16A8O95907 504 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 ERGP11308 486 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 PGAM1P18669 254 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 HRH2P25021 359 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 ITGA3P26006 1051 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 SLC1A2P43004 574 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 MAGEA3P43357 314 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 CARSP49589 748 aaKnown RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 FOXL2P58012 376 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 YBX1P67809 324 aaKnown RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 TAP2Q03519 686 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 CUL1Q13616 776 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 PRR30Q53SZ7 412 aaPredicted RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 RNASEH2BQ5TBB1 312 aaKnown RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 AGAP7PQ5VUJ5 663 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 PRAMEF13Q5VWM6 474 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 ICE2Q659A1 982 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 LRRC8EQ6NSJ5 796 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 KIRREL2Q6UWL6 708 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 SHISA6Q6ZSJ9 500 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 UBE2R2Q712K3 238 aaPredicted RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 ADCK2Q7Z695 626 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 KCNMB4Q86W47 210 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 METTL27Q8N6F8 245 aaPredicted RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 ZNF480Q8WV37 535 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 MIEF2Q96C03 454 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 CABS1Q96KC9 395 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 CCDC138Q96M89 665 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 AGAP4Q96P64 663 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 SLC30A3Q99726 388 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 SOX17Q9H6I2 414 aaPredicted RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 ZNF552Q9H707 407 aaPredicted RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 PPANQ9NQ55 473 aaKnown RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 LUZP4Q9P127 313 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 STOX2Q9P2F5 926 aaPredicted RBP11.41□□□□□ -0.58
MED28-203ENST00000503945 TAC3Q9UHF0 121 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 B3GNT3Q9Y2A9 372 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 HIVEP3Q5T1R4 2406 aa11.41□□□□□ -0.58
MED28-203ENST00000503945 ITPR2Q14571 2701 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 A1L4Q6 167 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 H7BY64 318 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 SMAPO00193 183 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 EIF3FO00303 357 aaPredicted RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 PRPF4O43172 522 aaKnown RBP eCLIP11.4□□□□□ -0.58
MED28-203ENST00000503945 HIST1H2AGP0C0S8 130 aaPredicted RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 ZGLP1P0C6A0 271 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 HIST1H2ADP20671 130 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 COL8A1P27658 744 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 RGS4P49798 205 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 MRPL49Q13405 166 aaKnown RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 RBBP7Q16576 425 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 SPANXN3Q5MJ09 141 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 GARNL3Q5VVW2 1013 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 SLC6A19Q695T7 634 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 RNF44Q7L0R7 432 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 PARP9Q8IXQ6 854 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 PDIK1LQ8N165 341 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 CSNK1A1LQ8N752 337 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 Q8NA96 180 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 C2CD4AQ8NCU7 369 aaPredicted RBP11.4□□□□□ -0.58
MED28-203ENST00000503945 PPFIBP2Q8ND30 876 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 STT3BQ8TCJ2 826 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 EEF1AKMT1Q8WVE0 214 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 HIST1H2AHQ96KK5 128 aa11.4□□□□□ -0.58
MED28-203ENST00000503945 PRAP1Q96NZ9 151 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms