RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 DHRS7Q9Y394 339 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 CSAG2Q9Y5P2 127 aa15.51■□□□□ 0.07
SCLT1-204ENST00000503215 SPTAN1Q13813 2472 aaKnown RBP15.51■□□□□ 0.07
SCLT1-204ENST00000503215 TCP11X1B4DZS4 312 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 E7ENX8 843 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 GFYI3L273 518 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 NRDCO43847 1150 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 SYF2O95926 243 aaKnown RBP15.5■□□□□ 0.07
SCLT1-204ENST00000503215 STATHP02808 62 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 CATP04040 527 aaKnown RBP15.5■□□□□ 0.07
SCLT1-204ENST00000503215 ERVK-10P10266 1014 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 GABRB3P28472 473 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 RPA3P35244 121 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-204ENST00000503215 SOX8P57073 446 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 TAP2Q03519 686 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 Q0VFX4 171 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 MRPL49Q13405 166 aaKnown RBP15.5■□□□□ 0.07
SCLT1-204ENST00000503215 LONRF1Q17RB8 773 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 HKDC1Q2TB90 917 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 FAM214AQ32MH5 1076 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 ZNF425Q6IV72 752 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 NEK10Q6ZWH5 1172 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 PLD3Q8IV08 490 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 PARP9Q8IXQ6 854 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 LRRC56Q8IYG6 542 aaPredicted RBP15.5■□□□□ 0.07
SCLT1-204ENST00000503215 CPNE9Q8IYJ1 553 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 SHISA5Q8N114 240 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 CISD2Q8N5K1 135 aaKnown RBP15.5■□□□□ 0.07
SCLT1-204ENST00000503215 COL26A1Q96A83 441 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 PWWP2AQ96N64 755 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 PSMG3-AS1Q96PY0 264 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 NDNQ99608 321 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 DDX47Q9H0S4 455 aaKnown RBP15.5■□□□□ 0.07
SCLT1-204ENST00000503215 ZNF304Q9HCX3 659 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 C5AR2Q9P296 337 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 SNX12Q9UMY4 172 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 VPS9D1Q9Y2B5 631 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 FAM169AQ9Y6X4 670 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 HEATR5BQ9P2D3 2071 aa15.5■□□□□ 0.07
SCLT1-204ENST00000503215 BLACEA4D250 179 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 SMAPO00193 183 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ZNF500O60304 480 aaPredicted RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 SEMA7AO75326 666 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 RNF224P0DH78 156 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 PIM1P11309 404 aaPredicted RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ITGA3P26006 1051 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 PGGT1BP53609 377 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 PRDX1Q06830 199 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 KLC1Q07866 573 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ARHGAP19Q14CB8 494 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 VWA2Q5GFL6 755 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ICE2Q659A1 982 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 IGFL3Q6UXB1 125 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 PPIL6Q8IXY8 311 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 STT3BQ8TCJ2 826 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 KCNJ9Q92806 393 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 SNRNP40Q96DI7 357 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 OR2A5Q96R48 311 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 NAP1L3Q99457 506 aaPredicted RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 AARSD1Q9BTE6 412 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 PLAC1Q9HBJ0 212 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 FAM114A2Q9NRY5 505 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 CUEDC1Q9NWM3 386 aaPredicted RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 MAP10Q9P2G4 905 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 KLHL42Q9P2K6 505 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 SLC17A6Q9P2U8 582 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 RUVBL1Q9Y265 456 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ICE1Q9Y2F5 2266 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 UTP20O75691 2785 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 USP27XA6NNY8 438 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 P2RX6O15547 441 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ZGLP1P0C6A0 271 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 MPC1LP0DKB6 136 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 IVDP26440 423 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 FNTAP49354 379 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 DHX9Q08211 1270 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 AIMP2Q13155 320 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 CRYMQ14894 314 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 PPP1R7Q15435 360 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 HIF1AQ16665 826 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 EIF2S3LQ2VIR3 472 aaKnown RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 TTLL9Q3SXZ7 439 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 CRB2Q5IJ48 1285 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 HP1BP3Q5SSJ5 553 aaPredicted RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 PRAMEF13Q5VWM6 474 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 HIST2H2BCQ6DN03 193 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 CUZD1Q86UP6 607 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 KCNMB4Q86W47 210 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 HPS6Q86YV9 775 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ARHGEF39Q8N4T4 335 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 CSNK1A1LQ8N752 337 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 FBXO15Q8NCQ5 510 aaPredicted RBP15.49■□□□□ 0.07
SCLT1-204ENST00000503215 OR11G2Q8NGC1 345 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 C8orf44Q96CB5 159 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 CABS1Q96KC9 395 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 CCDC68Q9H2F9 335 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ASF1BQ9NVP2 202 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 ADAMTS6Q9UKP5 1117 aa15.49■□□□□ 0.07
SCLT1-204ENST00000503215 SH2B3Q9UQQ2 575 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms