RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 UNC50Q53HI1 259 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 CATSPEREQ5SY80 951 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 HES3Q5TGS1 186 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 FRMD7Q6ZUT3 714 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 PRSS42Q7Z5A4 293 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 B3GNT8Q7Z7M8 397 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 ARFGAP2Q8N6H7 521 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 DCBLD1Q8N8Z6 715 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 RCBTB1Q8NDN9 531 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 OR4D9Q8NGE8 314 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 ZNF483Q8TF39 744 aaPredicted RBP13.06□□□□□ -0.32
CPNE1-227ENST00000498056 ATP6V1E2Q96A05 226 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 MOCOSQ96EN8 888 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 DPYSL5Q9BPU6 564 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 DPH7Q9BTV6 452 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 TWSG1Q9GZX9 223 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 SEMA6CQ9H3T2 930 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 GSTO2Q9H4Y5 243 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 INTS9Q9NV88 658 aaKnown RBP13.06□□□□□ -0.32
CPNE1-227ENST00000498056 GPRC5BQ9NZH0 403 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 EPHA6Q9UF33 1036 aa13.06□□□□□ -0.32
CPNE1-227ENST00000498056 IGHV5-51A0A0C4DH38 117 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 IGHV5-10-1A0A0J9YXX1 117 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 SLC9B1P1A6NJY1 282 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 TM4SF5O14894 197 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 BIRC5O15392 142 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 H2AFYO75367 372 aaKnown RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 KCNK5O95279 499 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 NPPBP16860 134 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 GNAZP19086 355 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 IMPDH1P20839 514 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 BGNP21810 368 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 SDHBP21912 280 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 VARSP26640 1264 aaKnown RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 CCR10P46092 362 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 CCNG1P51959 295 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 PDX1P52945 283 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 ABATP80404 500 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 IRF8Q02556 426 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 CLCQ05315 142 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 PRDX1Q06830 199 aaKnown RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 CYP4F3Q08477 520 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 CLPPQ16740 277 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 DEFB110Q30KQ9 67 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 XKR6Q5GH73 641 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 METTL2BQ6P1Q9 378 aaKnown RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 SLCO6A1Q86UG4 719 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 SLITRK4Q8IW52 837 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 FAM76AQ8TAV0 307 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 TRPC4APQ8TEL6 797 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 TRAPPC9Q96Q05 1148 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 GATA5Q9BWX5 397 aaPredicted RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 C1QTNF3Q9BXJ4 246 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 ZNF768Q9H5H4 540 aaKnown RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 NOL11Q9H8H0 719 aaKnown RBP13.05□□□□□ -0.32
CPNE1-227ENST00000498056 IPPKQ9H8X2 491 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 ACTR8Q9H981 624 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 PELI2Q9HAT8 420 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 C1GALT1Q9NS00 363 aa13.05□□□□□ -0.32
CPNE1-227ENST00000498056 IGKV1-8A0A0C4DH67 115 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 DCDC2BA2VCK2 349 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 H7BY64 318 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 OR7A17O14581 309 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 HAT1O14929 419 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 PRAMEF10O60809 474 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 CSO75390 466 aaKnown RBP13.04□□□□□ -0.32
CPNE1-227ENST00000498056 FKBP9O95302 570 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 SERPINE1P05121 402 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 EPORP19235 508 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 GRIA3P42263 894 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 CCR8P51685 355 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 INHBCP55103 352 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 LCP2Q13094 533 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 CHIT1Q13231 466 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 SQSTM1Q13501 440 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 RCN2Q14257 317 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 SLBPQ14493 270 aaKnown RBP eCLIP13.04□□□□□ -0.32
CPNE1-227ENST00000498056 FIGLAQ6QHK4 219 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 ZNF574Q6ZN55 896 aaPredicted RBP13.04□□□□□ -0.32
CPNE1-227ENST00000498056 OR52B6Q8NGF0 335 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 TMEM74Q96NL1 305 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 PRAP1Q96NZ9 151 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 CDK15Q96Q40 435 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 DEPDC7Q96QD5 511 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 CAPS2Q9BXY5 557 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 SHCBP1LQ9BZQ2 653 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 ZBTB26Q9HCK0 441 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 ANKMY1Q9P2S6 941 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 STK38LQ9Y2H1 464 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 SCN3AQ9NY46 2000 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 FER1L5A0AVI2 2057 aa13.04□□□□□ -0.32
CPNE1-227ENST00000498056 PIEZO1Q92508 2521 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 FEZF1A0PJY2 475 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 MAP3K7O43318 606 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 NPHS1O60500 1241 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 ZBTB11O95625 1053 aaPredicted RBP13.03□□□□□ -0.32
CPNE1-227ENST00000498056 HSPA4LO95757 839 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 MLYCDO95822 493 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 OTCP00480 354 aa13.03□□□□□ -0.32
CPNE1-227ENST00000498056 ANKRD34CP0C6C1 535 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms