RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ERGP11308 486 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ALAS2P22557 587 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 SKIV2L2P42285 1042 aaKnown RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 RGS4P49798 205 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 FASTKQ14296 549 aaKnown RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 NAA30Q147X3 362 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 GRM7Q14831 915 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 UAP1Q16222 522 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 RBM20Q5T481 1227 aaKnown RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 YOD1Q5VVQ6 348 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 LRRC8EQ6NSJ5 796 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 CYS1Q717R9 158 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 PTRH1Q86Y79 214 aaKnown RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 RAB43Q86YS6 212 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 CPNE9Q8IYJ1 553 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 TTC29Q8NA56 475 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 FBXO15Q8NCQ5 510 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 OR2A1Q8NGT9 310 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 UBLCP1Q8WVY7 318 aaPredicted RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 ASB11Q8WXH4 323 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 MRRFQ96E11 262 aaKnown RBP14.7□□□□□ -0.06
NUP50-219ENST00000497960 CYTH2Q99418 400 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ACAT2Q9BWD1 397 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 TXLNGYQ9BZA5 131 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ACSS3Q9H6R3 686 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ACSS2Q9NR19 701 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 TAS2R13Q9NYV9 303 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 TLK1Q9UKI8 766 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 KLK4Q9Y5K2 254 aa14.7□□□□□ -0.06
NUP50-219ENST00000497960 ARGFXA6NJG6 315 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 SUV39H1O43463 412 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 CCNDBP1O95273 360 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 C1QAP02745 245 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 AHSGP02765 367 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 TUBBP07437 444 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 PIM1P11309 404 aaPredicted RBP14.69□□□□□ -0.06
NUP50-219ENST00000497960 GP5P40197 560 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 PNLIPRP1P54315 467 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 NKAIN1Q4KMZ8 207 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 FAM45BPQ6NSW5 357 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 TCTN3Q6NUS6 607 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 EMBQ6PCB8 327 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 SUSD1Q6UWL2 747 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 CYHR1Q6ZMK1 362 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 TTLL10Q6ZVT0 673 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 FAM45AQ8TCE6 357 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 ADAMTS17Q8TE56 1095 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 AENQ8WTP8 325 aaKnown RBP14.69□□□□□ -0.06
NUP50-219ENST00000497960 VPS39Q96JC1 886 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 DPH7Q9BTV6 452 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 ING2Q9H160 280 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 RHOJQ9H4E5 214 aa14.69□□□□□ -0.06
NUP50-219ENST00000497960 MRPS30Q9NP92 439 aaKnown RBP14.69□□□□□ -0.06
NUP50-219ENST00000497960 UTP6Q9NYH9 597 aaKnown RBP14.69□□□□□ -0.06
NUP50-219ENST00000497960 PCM1Q15154 2024 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 A0A0J9YVX5 310 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 EXOC1LA0A1B0GW35 172 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 FAM95CA0A1B0GW59 222 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 A0A1B0GX78 115 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 GFYI3L273 518 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 CTSVO60911 334 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 SLC16A8O95907 504 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 GABRB3P28472 473 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 FOLR3P41439 243 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 VSX2P58304 361 aaPredicted RBP14.68□□□□□ -0.06
NUP50-219ENST00000497960 ILF2Q12905 390 aaKnown RBP14.68□□□□□ -0.06
NUP50-219ENST00000497960 FAM214AQ32MH5 1076 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 WASHC2DQ5SRD0 308 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 FAM69BQ5VUD6 431 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 UBE2R2Q712K3 238 aaPredicted RBP14.68□□□□□ -0.06
NUP50-219ENST00000497960 PIWIL4Q7Z3Z4 852 aaKnown RBP14.68□□□□□ -0.06
NUP50-219ENST00000497960 ZC3HC1Q86WB0 502 aaKnown RBP14.68□□□□□ -0.06
NUP50-219ENST00000497960 MCOLN3Q8TDD5 553 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 ZNF285Q96NJ3 590 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 IP6K3Q96PC2 410 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 RBBP8Q99708 897 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 FUT8Q9BYC5 575 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 TRIM55Q9BYV6 548 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 CUTCQ9NTM9 273 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 ANKMY1Q9P2S6 941 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 TAC3Q9UHF0 121 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 ANAPC2Q9UJX6 822 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 RAB21Q9UL25 225 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 TP53TG5Q9Y2B4 290 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 PTRH2Q9Y3E5 179 aaKnown RBP14.68□□□□□ -0.06
NUP50-219ENST00000497960 IKBKGQ9Y6K9 419 aa14.68□□□□□ -0.06
NUP50-219ENST00000497960 FER1L5A0AVI2 2057 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 MED13Q9UHV7 2174 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 OR2A25A4D2G3 310 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 DSCR3O14972 297 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 KLF7O75840 302 aaPredicted RBP14.67□□□□□ -0.06
NUP50-219ENST00000497960 DNAJB5O75953 348 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 INHBAP08476 426 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 SAT1P21673 171 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 OTX2P32243 289 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 SPRP35270 261 aaPredicted RBP14.67□□□□□ -0.06
NUP50-219ENST00000497960 CCL11P51671 97 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 RRADP55042 308 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 ABATP80404 500 aa14.67□□□□□ -0.06
NUP50-219ENST00000497960 PRDX1Q06830 199 aaKnown RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms