RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, human

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CXCL12-208	ENST00000496375	MGAT5	Q09328	741 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	ILF2	Q12905	390 aa	Known RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	MYBPC3	Q14896	1274 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	TMED2	Q15363	201 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	CYP2A13	Q16696	494 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	EIF2S3L	Q2VIR3	472 aa	Known RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	PLEKHN1	Q494U1	663 aa	Predicted RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	C4orf17	Q53FE4	359 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	HIST2H2BC	Q6DN03	193 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	PTRHD1	Q6GMV3	140 aa	Known RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	ZNF549	Q6P9A3	640 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	CEP128	Q6ZU80	1094 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	TTLL10	Q6ZVT0	673 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	MCAT	Q8IVS2	390 aa	Known RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	SSC4D	Q8WTU2	575 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	PYROXD1	Q8WU10	500 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	DLG3	Q92796	817 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	SLC22A18	Q96BI1	424 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	C19orf60	Q96EN9	201 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	MCMBP	Q9BTE3	642 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	TSPYL1	Q9H0U9	437 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	ZNF552	Q9H707	407 aa	Predicted RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	SAYSD1	Q9NPB0	183 aa		13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	FBXO6	Q9NRD1	293 aa	Predicted RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	IARS2	Q9NSE4	1012 aa	Known RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	PLEKHB1	Q9UF11	243 aa	Predicted RBP	13.79	□□□□□ -0.2
CXCL12-208	ENST00000496375	PCM1	Q15154	2024 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	RASGRF2	O14827	1237 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	NIPSNAP2	O75323	286 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	RNF224	P0DH78	156 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	ITGAX	P20702	1163 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	FMO4	P31512	558 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	GRIA3	P42263	894 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	CLCN7	P51798	805 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	ARSF	P54793	590 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	MPP1	Q00013	466 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	CUL1	Q13616	776 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	FCRL6	Q6DN72	434 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	FIGLA	Q6QHK4	219 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	SLC26A11	Q86WA9	606 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	IQCK	Q8N0W5	287 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	OR2L8	Q8NGY9	312 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	SNRNP40	Q96DI7	357 aa	Known RBP	13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	AARSD1	Q9BTE6	412 aa	Known RBP	13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	INTS7	Q9NVH2	962 aa	Known RBP	13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	NSMCE4A	Q9NXX6	385 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	SLC39A10	Q9ULF5	831 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	B3GNT3	Q9Y2A9	372 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	CRYL1	Q9Y2S2	319 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	NUP210L	Q5VU65	1888 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375	HIVEP3	Q5T1R4	2406 aa		13.78	□□□□□ -0.2
CXCL12-208	ENST00000496375		A0A1B0GX78	115 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	FAM159B	A6NKW6	160 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	AGPS	O00116	658 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	EIF3F	O00303	357 aa	Predicted RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	KLHL41	O60662	606 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	IPO13	O94829	963 aa	Known RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	HAUS5	O94927	633 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	AHSG	P02765	367 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	MCM3	P25205	808 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	MAGEA4	P43358	317 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	CARS	P49589	748 aa	Known RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	GPX6	P59796	221 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	SF1	Q15637	639 aa	Known RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	ZC3H12B	Q5HYM0	836 aa	Known RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	TTC23L	Q6PF05	361 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	CNST	Q6PJW8	725 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	IGFL3	Q6UXB1	125 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	NEK10	Q6ZWH5	1172 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	OVCH1	Q7RTY7	1134 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	CISD2	Q8N5K1	135 aa	Known RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	EIF1AD	Q8N9N8	165 aa	Known RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	LRRN4CL	Q8ND94	238 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	PRR7	Q8TB68	274 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	DENND1A	Q8TEH3	1009 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	SKA2	Q8WVK7	121 aa	Predicted RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	TM9SF4	Q92544	642 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	FKBP10	Q96AY3	582 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	FUT8	Q9BYC5	575 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	ILKAP	Q9H0C8	392 aa	Predicted RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	ATP13A2	Q9NQ11	1180 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	CUTC	Q9NTM9	273 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	CUEDC1	Q9NWM3	386 aa	Predicted RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	ZFAT	Q9P243	1243 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	MTRF1L	Q9UGC7	380 aa	Known RBP	13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	TEX15	Q9BXT5	2789 aa		13.77	□□□□□ -0.21
CXCL12-208	ENST00000496375	TCRBV9S1A1T	A0A576	114 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	DSCR3	O14972	297 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	ALOX12B	O75342	701 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	PIM1	P11309	404 aa	Predicted RBP	13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	MMP11	P24347	488 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	ITGA3	P26006	1051 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	SSTR1	P30872	391 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	BDKRB1	P46663	353 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	SOX8	P57073	446 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	TIAL1	Q01085	375 aa	Known RBP eCLIP	13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	AIMP2	Q13155	320 aa	Known RBP	13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	GRM7	Q14831	915 aa		13.76	□□□□□ -0.21
CXCL12-208	ENST00000496375	NR6A1	Q15406	480 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms