RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 PFN3P60673 137 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 RPS21P63220 83 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 LIPEQ05469 1076 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SRSF11Q05519 484 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 CLN3Q13286 438 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SGCGQ13326 291 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CAMK2GQ13555 558 aaPredicted RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 NAE1Q13564 534 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TSTA3Q13630 321 aaPredicted RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 BLMHQ13867 455 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CAPRIN1Q14444 709 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 TLR1Q15399 786 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CYP2A13Q16696 494 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 LRRC36Q1X8D7 754 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 FAM174BQ3ZCQ3 159 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 FAM98BQ52LJ0 330 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 USP39Q53GS9 565 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 EGFLAMQ63HQ2 1017 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 LPCAT4Q643R3 524 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CYP2R1Q6VVX0 501 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 EP400NLQ6ZTU2 488 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SPRED2Q7Z698 418 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TMPRSS11BQ86T26 416 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PDZD3Q86UT5 571 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 AMZ2Q86W34 360 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 IFNEQ86WN2 208 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PTRH1Q86Y79 214 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 SLC15A3Q8IY34 581 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CFAP206Q8IYR0 622 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TBC1D21Q8IYX1 336 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 HDDC3Q8N4P3 179 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TBC1D19Q8N5T2 526 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PACRGLQ8N7B6 248 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 BEND7Q8N7W2 519 aaPredicted RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 OR9A1PQ8NGU1 263 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 OR2L2Q8NH16 312 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 OR56A3Q8NH54 315 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 DNAJB14Q8TBM8 379 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 SETD7Q8WTS6 366 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 NAT14Q8WUY8 206 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 NRG4Q8WWG1 115 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 MYLIPQ8WY64 445 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TMEM125Q96AQ2 219 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 VPS33AQ96AX1 596 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TESCQ96BS2 214 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CXorf40BQ96DE9 158 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 OR52E6Q96RD3 313 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 HBEGFQ99075 208 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CDX2Q99626 313 aaPredicted RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 P2RY13Q9BPV8 354 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 KXD1Q9BQD3 176 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 LRFN3Q9BTN0 628 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ACPTQ9BZG2 426 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PCBD2Q9H0N5 130 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ATG10Q9H0Y0 220 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 RSPH9Q9H1X1 276 aaPredicted RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 KCNH6Q9H252 994 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 MTG2Q9H4K7 406 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 CLMPQ9H6B4 373 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 WDR26Q9H7D7 661 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ZDHHC4Q9NPG8 344 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PRSS16Q9NQE7 514 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ATAD3AQ9NVI7 634 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ARMC1Q9NVT9 282 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 FAM120CQ9NX05 1096 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 AHSPQ9NZD4 102 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 VPS29Q9UBQ0 182 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ZNHIT2Q9UHR6 403 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 RIMS3Q9UJD0 308 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 TMPRSS11EQ9UL52 423 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ASF1AQ9Y294 204 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 PCDHA9Q9Y5H5 950 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 ST14Q9Y5Y6 855 aa6.71□□□□□ -1.34
USP39-219ENST00000496047 LAMA2P24043 3122 aaKnown RBP6.71□□□□□ -1.34
USP39-219ENST00000496047 BDP1A6H8Y1 2624 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 KCNE1BA0A087WTH5 132 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 A0A096LPI6 279 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 A0A1B0GTL3 188 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 A6NJY4 79 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 FAM220BPB1ANY3 271 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 H3BNX3 289 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 MEN1O00255 615 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CACNB4O00305 520 aaPredicted RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 MID1O15344 667 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CAPN5O15484 640 aaPredicted RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 RNASEH2AO75792 299 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 POP7O75817 140 aaKnown RBP6.7□□□□□ -1.34
USP39-219ENST00000496047 EPN2O95208 641 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 ANXA6P08133 673 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 ACADMP11310 421 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 BCKDHAP12694 445 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 CDH1P12830 882 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 LAMP2P13473 410 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 COX7A2P14406 83 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 AMD1P17707 334 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 IMPA1P29218 277 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 NTSR1P30989 418 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 KIR3DL1P43629 444 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 GSTM5P46439 218 aa6.7□□□□□ -1.34
USP39-219ENST00000496047 TBPL1P62380 186 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms