RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 DNALI1O14645 258 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 ITGA3P26006 1051 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 CARSP49589 748 aaKnown RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 MPP1Q00013 466 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 RBBP7Q16576 425 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 PRTGQ2VWP7 1150 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 PLEKHN1Q494U1 663 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 SPANXN3Q5MJ09 141 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 THEMIS2Q5TEJ8 643 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 IRAK1BP1Q5VVH5 260 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 PRAMEF13Q5VWM6 474 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 CLEC18BQ6UXF7 455 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 UBE2R2Q712K3 238 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 PAQR7Q86WK9 346 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 PALM2Q8IXS6 379 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 METTL27Q8N6F8 245 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 CLEC18CQ8NCF0 446 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 C2CD4AQ8NCU7 369 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 PPFIBP2Q8ND30 876 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 GIMAP7Q8NHV1 300 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 MCOLN3Q8TDD5 553 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 RERGQ96A58 199 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 MIEF2Q96C03 454 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 CABS1Q96KC9 395 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 ABCF3Q9NUQ8 709 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 STOX2Q9P2F5 926 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 ZNF282Q9UDV7 671 aaPredicted RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 TAC3Q9UHF0 121 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 PCYOX1Q9UHG3 505 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 TRMT6Q9UJA5 497 aaKnown RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 FBXL4Q9UKA2 621 aa12.16□□□□□ -0.46
PTPRF-214ENST00000496043 ASH1LQ9NR48 2969 aaKnown RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 TNRC6AQ8NDV7 1962 aaKnown RBP12.16□□□□□ -0.46
PTPRF-214ENST00000496043 NBASA2RRP1 2371 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 IGKV1-8A0A0C4DH67 115 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 PRPF4O43172 522 aaKnown RBP eCLIP12.15□□□□□ -0.461e-8■■■□□ 14.8
PTPRF-214ENST00000496043 NRP2O60462 931 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 MED26O95402 600 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 ZGLP1P0C6A0 271 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 GNLYP22749 145 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 HRH2P25021 359 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 RGS4P49798 205 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 DHX9Q08211 1270 aaKnown RBP12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CRYMQ14894 314 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 TUBB8Q3ZCM7 444 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 GARNL3Q5VVW2 1013 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 ZNF425Q6IV72 752 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 LRRC8EQ6NSJ5 796 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 KIRREL2Q6UWL6 708 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 SYDE1Q6ZW31 735 aaPredicted RBP12.15□□□□□ -0.46
PTPRF-214ENST00000496043 PARP9Q8IXQ6 854 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CPNE9Q8IYJ1 553 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CSNK1A1LQ8N752 337 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 Q8NA96 180 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 STT3BQ8TCJ2 826 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CD200R1Q8TD46 325 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 EEF1AKMT1Q8WVE0 214 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 SLCO2A1Q92959 643 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 MVB12AQ96EY5 273 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CCDC138Q96M89 665 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 OR2A5Q96R48 311 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CRB3Q9BUF7 120 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 YIPF2Q9BWQ6 316 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 DDX47Q9H0S4 455 aaKnown RBP12.15□□□□□ -0.46
PTPRF-214ENST00000496043 TMEM184CQ9NVA4 438 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 TAS2R13Q9NYV9 303 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 LUZP4Q9P127 313 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 MAP10Q9P2G4 905 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CTSFQ9UBX1 484 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 B3GNT3Q9Y2A9 372 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 HS3ST3B1Q9Y662 390 aa12.15□□□□□ -0.46
PTPRF-214ENST00000496043 CCDC88CQ9P219 2028 aa12.15□□□□□ -0.47
PTPRF-214ENST00000496043 SETXQ7Z333 2677 aaKnown RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 SNRNP200O75643 2136 aaKnown RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 H7BY64 318 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 AHSGP02765 367 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 EZRP15311 586 aaKnown RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 FBLP22087 321 aaKnown RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 EMP2P54851 167 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 KLC1Q07866 573 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 SRSF1Q07955 248 aaKnown RBP eCLIP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 NDUFA9Q16795 377 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 BBS9Q3SYG4 887 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 FHL5Q5TD97 284 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 AGAP7PQ5VUJ5 663 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 KIAA0408Q6ZU52 694 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 PIWIL4Q7Z3Z4 852 aaKnown RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 ADCK2Q7Z695 626 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 LRRC56Q8IYG6 542 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 PRSS58Q8IYP2 241 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 IQCKQ8N0W5 287 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 PDIK1LQ8N165 341 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 DTWD1Q8N5C7 304 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 MMABQ96EY8 250 aaPredicted RBP12.14□□□□□ -0.47
PTPRF-214ENST00000496043 C10orf90Q96M02 699 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 RUNDC3BQ96NL0 473 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 PRAP1Q96NZ9 151 aa12.14□□□□□ -0.47
PTPRF-214ENST00000496043 AGAP4Q96P64 663 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms