RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 ANGPTL2Q9UKU9 493 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 AP3M1Q9Y2T2 418 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 RNF11Q9Y3C5 154 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ASB1Q9Y576 335 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 GPR45Q9Y5Y3 372 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 ST14Q9Y5Y6 855 aa9.94□□□□□ -0.82
HDAC3-214ENST00000495485 KNTC1P50748 2209 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 A0A088AWK7 358 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 A0A1W2PP18 115 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 TMEM202A6NGA9 273 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 NPIPB8E9PQR5 432 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 H0YIV9 168 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 NR5A2O00482 541 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 TRIM38O00635 465 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 TNFRSF10CO14798 259 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 FFAR3O14843 346 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 KHNYNO15037 678 aaKnown RBP9.93□□□□□ -0.82
HDAC3-214ENST00000495485 YKT6O15498 198 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 GPR42O15529 346 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SLC16A8O95907 504 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 IGHV4-34P06331 123 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 ITPKAP23677 461 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 ACADLP28330 430 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 NDUFS1P28331 727 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 IMPA1P29218 277 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SERPINB1P30740 379 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 BDKRB1P46663 353 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 MTTPP55157 894 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 CTBSQ01459 385 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 CYP2A13Q16696 494 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 PLA2G4EQ3MJ16 856 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SAMD4BQ5PRF9 694 aaKnown RBP9.93□□□□□ -0.82
HDAC3-214ENST00000495485 THEMIS2Q5TEJ8 643 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 IL23RQ5VWK5 629 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 FRG2Q64ET8 278 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 REP15Q6BDI9 236 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 PGM2L1Q6PCE3 622 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 PAOXQ6QHF9 649 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 BLOC1S3Q6QNY0 202 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 LCTLQ6UWM7 567 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 MBOAT1Q6ZNC8 495 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 C11orf96Q7Z7L8 435 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 ZNF547Q8IVP9 402 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 MFSD2AQ8NA29 543 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 OR5K2Q8NHB8 316 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 PYCR2Q96C36 320 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 ERLEC1Q96DZ1 483 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SPDL1Q96EA4 605 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 FRG2BQ96QU4 278 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 CDRT15Q96T59 188 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 DPY30Q9C005 99 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 PITHD1Q9GZP4 211 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-214ENST00000495485 OR52A5Q9H2C5 316 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 DENND2DQ9H6A0 471 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-214ENST00000495485 C6orf106Q9H6K1 298 aaPredicted RBP9.93□□□□□ -0.82
HDAC3-214ENST00000495485 MVB12BQ9H7P6 319 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 RNPEPL1Q9HAU8 725 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SPAG4Q9NPE6 437 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 MBNL1Q9NR56 388 aaKnown RBP9.93□□□□□ -0.82
HDAC3-214ENST00000495485 ADA2Q9NZK5 511 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 STOML1Q9UBI4 398 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SLC6A14Q9UN76 642 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SLC17A4Q9Y2C5 497 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.93□□□□□ -0.82
HDAC3-214ENST00000495485 COLEC10Q9Y6Z7 277 aa9.93□□□□□ -0.82
HDAC3-214ENST00000495485 ARID1BQ8NFD5 2236 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 VILLO15195 856 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SLC31A1O15431 190 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 GFRA3O60609 400 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 DNAJA2O60884 412 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 PDYNP01213 254 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 IL6P05231 212 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 ZNF883P0CG24 379 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 C1GALT1C1LP0DN25 315 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 DDX5P17844 614 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 JAK1P23458 1154 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 CD38P28907 300 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 THOP1P52888 689 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 ACTR3P61158 418 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 PSME3P61289 254 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 RPL38P63173 70 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 TRAP1Q12931 704 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SRSF5Q13243 272 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 LRP8Q14114 963 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 KPNB1Q14974 876 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 DPY19L1Q2PZI1 675 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SGO1Q5FBB7 561 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 ATG9BQ674R7 924 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 MED27Q6P2C8 311 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 ZFP1Q6P2D0 407 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 CYP20A1Q6UW02 462 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SCIMPQ6UWF3 145 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 CHST15Q7LFX5 561 aaPredicted RBP9.92□□□□□ -0.82
HDAC3-214ENST00000495485 PACS2Q86VP3 889 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 SFRP1Q8N474 314 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 MINDY1Q8N5J2 469 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 TBC1D19Q8N5T2 526 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 DCBLD1Q8N8Z6 715 aa9.92□□□□□ -0.82
HDAC3-214ENST00000495485 PPFIBP2Q8ND30 876 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms