RNA–Protein interactions for RNA: ENST00000495434.1

MRPL55-232, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 224 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-232ENST00000495434 CASRP41180 1078 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 FOLR3P41439 243 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 MGAT5Q09328 741 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 KLRB1Q12918 225 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 PRTGQ2VWP7 1150 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 HECTD2Q5U5R9 776 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 FRMPD2BQ6IN97 320 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 PRMT9Q6P2P2 845 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 ZNF572Q7Z3I7 529 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-232ENST00000495434 SLC26A11Q86WA9 606 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 PTRH1Q86Y79 214 aaKnown RBP13.41□□□□□ -0.26
MRPL55-232ENST00000495434 FBXO36Q8NEA4 188 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 PDLIM5Q96HC4 596 aaKnown RBP13.41□□□□□ -0.26
MRPL55-232ENST00000495434 TRIM55Q9BYV6 548 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 SLC22A11Q9NSA0 550 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 NSMCE4AQ9NXX6 385 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 ZFATQ9P243 1243 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 STOX2Q9P2F5 926 aaPredicted RBP13.41□□□□□ -0.26
MRPL55-232ENST00000495434 NXT1Q9UKK6 140 aaKnown RBP13.41□□□□□ -0.26
MRPL55-232ENST00000495434 PDE10AQ9Y233 779 aa13.41□□□□□ -0.26
MRPL55-232ENST00000495434 PTRH2Q9Y3E5 179 aaKnown RBP13.41□□□□□ -0.26
MRPL55-232ENST00000495434 LOC105369274A0A096LPK9 316 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 LOC102723532A0A0G2JNH3 316 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 ARGFXA6NJG6 315 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 H0YGG7 62 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 TXNDC9O14530 226 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 CNOT3O75175 753 aaKnown RBP13.4□□□□□ -0.26
MRPL55-232ENST00000495434 DNAJB5O75953 348 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 TSPAN12O95859 305 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 CCND1P24385 295 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 ARF3P61204 181 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-232ENST00000495434 YBX1P67809 324 aaKnown RBP13.4□□□□□ -0.26
MRPL55-232ENST00000495434 PDAP1Q13442 181 aaKnown RBP13.4□□□□□ -0.26
MRPL55-232ENST00000495434 MUM1Q2TAK8 710 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 FAM69BQ5VUD6 431 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 GARNL3Q5VVW2 1013 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 CPZQ66K79 652 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 DUPD1Q68J44 220 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 SYT10Q6XYQ8 523 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 ASB18Q6ZVZ8 466 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 CYS1Q717R9 158 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 MRGPREQ86SM8 312 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 ANKMY2Q8IV38 441 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 OR4N4Q8N0Y3 316 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 GPATCH11Q8N954 259 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 PPFIBP2Q8ND30 876 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 ANKRD7Q92527 254 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 MVB12AQ96EY5 273 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 LINGO1Q96FE5 620 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 FER1L6-AS2Q96M78 137 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 OR2A5Q96R48 311 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 SLC25A23Q9BV35 468 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
MRPL55-232ENST00000495434 CCDC177Q9NQR7 707 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-232ENST00000495434 TENM4Q6N022 2769 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 VSTM2BA6NLU5 285 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 RAD51CO43502 376 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 NRP2O60462 931 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 HIST1H2AGP0C0S8 130 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-232ENST00000495434 HIST1H2ADP20671 130 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 CCL11P51671 97 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 AP1S2P56377 157 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 CAV1Q03135 178 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 TSTA3Q13630 321 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-232ENST00000495434 ATP1A4Q13733 1029 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 FASTKD3Q14CZ7 662 aaKnown RBP13.39□□□□□ -0.27
MRPL55-232ENST00000495434 THEMIS2Q5TEJ8 643 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 COX15Q7KZN9 410 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 ZC3HC1Q86WB0 502 aaKnown RBP13.39□□□□□ -0.27
MRPL55-232ENST00000495434 HPS6Q86YV9 775 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 ZBED8Q8IZ13 594 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 RERGQ96A58 199 aaPredicted RBP13.39□□□□□ -0.27
MRPL55-232ENST00000495434 HIST1H2AHQ96KK5 128 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 HIST1H2AJQ99878 128 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 H2AFJQ9BTM1 129 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 TRIM54Q9BYV2 358 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 ZNF304Q9HCX3 659 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 TMEM184CQ9NVA4 438 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 SLC17A6Q9P2U8 582 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 ADAMTS6Q9UKP5 1117 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 G3BP2Q9UN86 482 aaKnown RBP13.39□□□□□ -0.27
MRPL55-232ENST00000495434 CDC14AQ9UNH5 594 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 UTP11Q9Y3A2 253 aaKnown RBP13.39□□□□□ -0.27
MRPL55-232ENST00000495434 ZNF451Q9Y4E5 1061 aa13.39□□□□□ -0.27
MRPL55-232ENST00000495434 KCNE1BA0A087WTH5 132 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 K7EM74 188 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 PEX12O00623 359 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 KLHL41O60662 606 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 WISP1O95388 367 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 EIF2S1P05198 315 aaKnown RBP13.38□□□□□ -0.27
MRPL55-232ENST00000495434 UMODP07911 640 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 ENO2P09104 434 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-232ENST00000495434 GSTA2P09210 222 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 MMP11P24347 488 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 OTX2P32243 289 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 CSRP3P50461 194 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 PGDP52209 483 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 SOX8P57073 446 aa13.38□□□□□ -0.27
MRPL55-232ENST00000495434 TBPL1P62380 186 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms