RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 ERLIN1O75477 346 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 IPO13O94829 963 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 WDR47O94967 919 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 HBQ1P09105 142 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 RBP1P09455 135 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 GFAPP14136 432 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 EZRP15311 586 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 KRT15P19012 456 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 GMPRP36959 345 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 MAGEA12P43365 314 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 SLCO1A2P46721 670 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 YBX1P67809 324 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 DLG1Q12959 904 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 ST3GAL2Q16842 350 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 PTCHD3Q3KNS1 767 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TCTE1Q5JU00 501 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TLDC1Q6P9B6 456 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 C6orf15Q6UXA7 325 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TIFABQ6ZNK6 161 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 THOC6Q86W42 341 aaKnown RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TDRPQ86YL5 185 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 CACNA2D3Q8IZS8 1091 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 NLGN4XQ8N0W4 816 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TBC1D19Q8N5T2 526 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 ESX1Q8N693 406 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 NLGN4YQ8NFZ3 816 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 OR1L3Q8NH93 324 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 RERGQ96A58 199 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 CLIP3Q96DZ5 547 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 PRAP1Q96NZ9 151 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 ZFYVE21Q9BQ24 234 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 ACTR5Q9H9F9 607 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 SLC6A20Q9NP91 592 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 PCMTD2Q9NV79 361 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TMEM184CQ9NVA4 438 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 EURLQ9NYK6 297 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 NUDT4Q9NZJ9 180 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 PILRAQ9UKJ1 303 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 SLC22A14Q9Y267 594 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 TMEM184BQ9Y519 407 aaPredicted RBP11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 KCNE2Q9Y6J6 123 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 AP1M2Q9Y6Q5 423 aa11.6□□□□□ -0.55
CSNK1E-213ENST00000495232 A0A0J9YVX5 310 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 OR2A25A4D2G3 310 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 UBXN8O00124 270 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 ZSCAN9O15535 394 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 ZNF749O43361 778 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 RAD1O60671 282 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 RFPL1O75677 317 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 NTRK1P04629 796 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 EIF2S1P05198 315 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 KLK3P07288 261 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 NUDT17P0C025 328 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 CDH1P12830 882 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 NPPBP16860 134 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 ZNF28P17035 718 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 CSRP3P50461 194 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 CCR8P51685 355 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 NAA30Q147X3 362 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 MANEAQ5SRI9 462 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 LCA5Q86VQ0 697 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 TTC29Q8NA56 475 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 GALNT6Q8NCL4 622 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 PDPRQ8NCN5 879 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 ACMSDQ8TDX5 336 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 EPS8L3Q8TE67 593 aaKnown RBP11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 SLC5A11Q8WWX8 675 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 RNF31Q96EP0 1072 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 ATOH8Q96SQ7 321 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 NDC1Q9BTX1 674 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 CAPS2Q9BXY5 557 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 TXLNGQ9NUQ3 528 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 CUEDC1Q9NWM3 386 aaPredicted RBP11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 PCDHB3Q9Y5E6 796 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 ACACBO00763 2458 aa11.59□□□□□ -0.55
CSNK1E-213ENST00000495232 CELSR3Q9NYQ7 3312 aa11.58□□□□□ -0.55
CSNK1E-213ENST00000495232 IGF2RP11717 2491 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 IGKV1-8A0A0C4DH67 115 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 GOLGA8RI6L899 631 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 TAF4O00268 1085 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 CCNT2O60583 730 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 CTSVO60911 334 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 SMIM24O75264 130 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 STK16O75716 305 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 TIAF1O95411 115 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 GNAZP19086 355 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 GGT5P36269 586 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 GDF5P43026 501 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 HSPA7P48741 367 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 ARSFP54793 590 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 VSX2P58304 361 aaPredicted RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 RPS15AP62244 130 aaKnown RBP11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 RELAQ04206 551 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 CLN3Q13286 438 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 MAP7Q14244 749 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 GRM7Q14831 915 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 RASA2Q15283 850 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 ZNF425Q6IV72 752 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 RNF44Q7L0R7 432 aa11.58□□□□□ -0.56
CSNK1E-213ENST00000495232 TMPRSS11BQ86T26 416 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms