RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 ATL1Q8WXF7 558 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 ZNF285Q96NJ3 590 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 IP6K3Q96PC2 410 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 RHOJQ9H4E5 214 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 SLC6A20Q9NP91 592 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 ARL15Q9NXU5 204 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 STOX2Q9P2F5 926 aaPredicted RBP16.89■□□□□ 0.29
HDAC4-211ENST00000494800 ADAMTS6Q9UKP5 1117 aa16.89■□□□□ 0.29
HDAC4-211ENST00000494800 G3BP2Q9UN86 482 aaKnown RBP16.89■□□□□ 0.29
HDAC4-211ENST00000494800 HYKKA2RU49 373 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 SSTR1P30872 391 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 RRADP55042 308 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 TBPL1P62380 186 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 RELAQ04206 551 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 PRAMEF13Q5VWM6 474 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 FRMPD2BQ6IN97 320 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 AGTRAPQ6RW13 159 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 C3orf62Q6ZUJ4 267 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 CYS1Q717R9 158 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 PAQR7Q86WK9 346 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 FBXO25Q8TCJ0 367 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 FKBP10Q96AY3 582 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 PDLIM5Q96HC4 596 aaKnown RBP16.88■□□□□ 0.29
HDAC4-211ENST00000494800 OLFM1Q99784 485 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 ACSS2Q9NR19 701 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 PTRH2Q9Y3E5 179 aaKnown RBP16.88■□□□□ 0.29
HDAC4-211ENST00000494800 PSAT1Q9Y617 370 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 KALRNO60229 2985 aa16.88■□□□□ 0.29
HDAC4-211ENST00000494800 TSPAN12O95859 305 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 IGHEP01854 428 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 ALBP02768 609 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 ZNF37AP17032 561 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-211ENST00000494800 EMP3P54852 163 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 SSPNQ14714 243 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 SLC9A5Q14940 896 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 MUM1Q2TAK8 710 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 CAPN13Q6MZZ7 669 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-211ENST00000494800 PRMT9Q6P2P2 845 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 FBXO42Q6P3S6 717 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 CEP128Q6ZU80 1094 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 LRRC56Q8IYG6 542 aaPredicted RBP16.87■□□□□ 0.29
HDAC4-211ENST00000494800 OR2Y1Q8NGV0 311 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 ANKRD7Q92527 254 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 ALKBH8Q96BT7 664 aaKnown RBP16.87■□□□□ 0.29
HDAC4-211ENST00000494800 PTERQ96BW5 349 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 TSPAN17Q96FV3 270 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 ABHD17AQ96GS6 310 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 CABS1Q96KC9 395 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 CPNE1Q99829 537 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 POPDC3Q9HBV1 291 aa16.87■□□□□ 0.29
HDAC4-211ENST00000494800 NXT1Q9UKK6 140 aaKnown RBP16.87■□□□□ 0.29
HDAC4-211ENST00000494800 LOC105369274A0A096LPK9 316 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 LOC102723532A0A0G2JNH3 316 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 TCRBV9S1A1TA0A576 114 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 ARGFXA6NJG6 315 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 H0YGG7 62 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 PEX12O00623 359 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 PRPF4O43172 522 aaKnown RBP eCLIP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 KLF7O75840 302 aaPredicted RBP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 OTX2P32243 289 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 STX2P32856 288 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 GRK3P35626 688 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 MAGEA4P43358 317 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 GCGRP47871 477 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 ARF3P61204 181 aaPredicted RBP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 YBX1P67809 324 aaKnown RBP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 NFKB2Q00653 900 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 POU4F1Q01851 419 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 NAE1Q13564 534 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 LACTB2Q53H82 288 aaPredicted RBP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 ZNF425Q6IV72 752 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 MRPL14Q6P1L8 145 aaKnown RBP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 MED25Q71SY5 747 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 PRICKLE2Q7Z3G6 844 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 C17orf64Q86WR6 236 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 SPNS2Q8IVW8 549 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 CTAGE3PQ8IX95 158 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 OR4N4Q8N0Y3 316 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 CSNK1A1LQ8N752 337 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 TMEM102Q8N9M5 508 aaPredicted RBP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 ADAMTS17Q8TE56 1095 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 HAUS8Q9BT25 410 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 ATG10Q9H0Y0 220 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 ING2Q9H160 280 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 WDR54Q9H977 334 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 GPAMQ9HCL2 828 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 TMEM184CQ9NVA4 438 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 CDC14AQ9UNH5 594 aa16.86■□□□□ 0.29
HDAC4-211ENST00000494800 NOVA2Q9UNW9 492 aaKnown RBP16.86■□□□□ 0.29
HDAC4-211ENST00000494800 IGKV1-8A0A0C4DH67 115 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 H7BY64 318 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 SLC28A2O43868 658 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 NRP2O60462 931 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 ITGAXP20702 1163 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 GP5P40197 560 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 TAS2R39P59534 338 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 RPS15AP62244 130 aaKnown RBP16.85■□□□□ 0.29
HDAC4-211ENST00000494800 SLC7A5Q01650 507 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 PHKG1Q16816 387 aa16.85■□□□□ 0.29
HDAC4-211ENST00000494800 GARNL3Q5VVW2 1013 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms