RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RNASEH2BQ5TBB1 312 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 THEMIS2Q5TEJ8 643 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 YOD1Q5VVQ6 348 aaPredicted RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 SLC6A19Q695T7 634 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 UBE2R2Q712K3 238 aaPredicted RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 RNF44Q7L0R7 432 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ADCK2Q7Z695 626 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 LAPTM4BQ86VI4 370 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 KCNMB4Q86W47 210 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 PLD3Q8IV08 490 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 CISD2Q8N5K1 135 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 AMER2Q8N7J2 671 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.16□□□□□ -0.94
MSH5-218ENST00000494646 STT3BQ8TCJ2 826 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 EEF1AKMT1Q8WVE0 214 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ASB11Q8WXH4 323 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ALKBH8Q96BT7 664 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 CABS1Q96KC9 395 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 CAPZA3Q96KX2 299 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 PWWP2AQ96N64 755 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 NDNQ99608 321 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 SPSB2Q99619 263 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ZFYVE21Q9BQ24 234 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 AARSD1Q9BTE6 412 aaKnown RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 KCNF1Q9H3M0 494 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 FAM114A2Q9NRY5 505 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 C5AR2Q9P296 337 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ANKMY1Q9P2S6 941 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 CTSFQ9UBX1 484 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 ASIC3Q9UHC3 531 aa9.16□□□□□ -0.94
MSH5-218ENST00000494646 USP9XQ93008 2570 aaPredicted RBP9.16□□□□□ -0.94
MSH5-218ENST00000494646 LRRK2Q5S007 2527 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 GOLGA6L10A0A0M3HER8 536 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 C2orf72A6NCS6 295 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 USP27XA6NNY8 438 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 TCP11X1B4DZS4 312 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 E7ENX8 843 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 H7BY64 318 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 GFYI3L273 518 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 SMAPO00193 183 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 DNALI1O14645 258 aaPredicted RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 VPS26AO75436 327 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 SORBS2O94875 1100 aaKnown RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 SLC16A8O95907 504 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 IGHEP01854 428 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 AHSGP02765 367 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 ERGP11308 486 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 MMP11P24347 488 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 GABRB3P28472 473 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 HSD17B2P37059 387 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 GLRBP48167 497 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 FNTAP49354 379 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 PGGT1BP53609 377 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 TIAL1Q01085 375 aaKnown RBP eCLIP9.15□□□□□ -0.94
MSH5-218ENST00000494646 TAP2Q03519 686 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 OCA2Q04671 838 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 KLC1Q07866 573 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 MRPL49Q13405 166 aaKnown RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 RBBP7Q16576 425 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 HIF1AQ16665 826 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 BBS9Q3SYG4 887 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 VWA5B1Q5TIE3 1220 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 ARMC3Q5W041 872 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 ICE2Q659A1 982 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 KIRREL2Q6UWL6 708 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 NEK10Q6ZWH5 1172 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 PIWIL4Q7Z3Z4 852 aaKnown RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 PAQR7Q86WK9 346 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 ZGRF1Q86YA3 2104 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 IGDCC3Q8IVU1 814 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 KLHL7Q8IXQ5 586 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 FAM26EQ8N5C1 309 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 CD200R1Q8TD46 325 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 CALML6Q8TD86 181 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 KCNJ9Q92806 393 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 PNPLA2Q96AD5 504 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 FKBP10Q96AY3 582 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 MIEF2Q96C03 454 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 C8orf44Q96CB5 159 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 MMABQ96EY8 250 aaPredicted RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 PRAP1Q96NZ9 151 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 PLCD4Q9BRC7 762 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 PPANQ9NQ55 473 aaKnown RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 CUEDC1Q9NWM3 386 aaPredicted RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 FBXL4Q9UKA2 621 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 ADAMTS6Q9UKP5 1117 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 RUVBL1Q9Y265 456 aaKnown RBP9.15□□□□□ -0.94
MSH5-218ENST00000494646 KLK4Q9Y5K2 254 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 HS3ST3B1Q9Y662 390 aa9.15□□□□□ -0.94
MSH5-218ENST00000494646 NAV2Q8IVL1 2488 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 ICE1Q9Y2F5 2266 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 A0A0A6YYC8 382 aaPredicted RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 BLACEA4D250 179 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 VSTM2BA6NLU5 285 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 ZNF839A8K0R7 811 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 I3L1I5 382 aaPredicted RBP9.14□□□□□ -0.95
MSH5-218ENST00000494646 HAT1O14929 419 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 ZGLP1P0C6A0 271 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 PGAM1P18669 254 aa9.14□□□□□ -0.95
MSH5-218ENST00000494646 FBLP22087 321 aaKnown RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms