RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 KCNMB4Q86W47 210 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 APLFQ8IW19 511 aaPredicted RBP12.68□□□□□ -0.38
ERCC3-209ENST00000494464 ENDOVQ8N8Q3 282 aaKnown RBP12.68□□□□□ -0.38
ERCC3-209ENST00000494464 LMNTD1Q8N9Z9 388 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 GIMAP7Q8NHV1 300 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 C9orf43Q8TAL5 461 aaPredicted RBP12.68□□□□□ -0.38
ERCC3-209ENST00000494464 SLC44A1Q8WWI5 657 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 THAP4Q8WY91 577 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 CFAP36Q96G28 342 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 C17orf62Q9BQA9 187 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 EPN3Q9H201 632 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 ENAMQ9NRM1 1142 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 GALPQ9UBC7 116 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 FBXO5Q9UKT4 447 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 MAN2B2Q9Y2E5 1009 aa12.68□□□□□ -0.38
ERCC3-209ENST00000494464 GCN1Q92616 2671 aaKnown RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 IQANK1A0A1B0GTG1 560 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 TMEM120BA0PK00 339 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 FAM159BA6NKW6 160 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 ARHGEF33A8MVX0 844 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 C9J4A7 227 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 MYO1CO00159 1063 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 EIF3FO00303 357 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 PRPF4O43172 522 aaKnown RBP eCLIP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 FAM155BO75949 473 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 CATP04040 527 aaKnown RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 ENO3P13929 434 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 AGXTP21549 392 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 GCGRP47871 477 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 NAB1Q13506 487 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 IL10RAQ13651 578 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 FRG1Q14331 258 aaKnown RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 ARHGAP19Q14CB8 494 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 NAA25Q14CX7 972 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 SF1Q15637 639 aaKnown RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 PTCHD3Q3KNS1 767 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 KBTBD12Q3ZCT8 623 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 HSP90AA5PQ58FG0 334 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 SPANXN3Q5MJ09 141 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 LCN10Q6JVE6 187 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF549Q6P9A3 640 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 SLC26A11Q86WA9 606 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 CNTN4Q8IWV2 1026 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 FAM20CQ8IXL6 584 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 SRRM1Q8IYB3 904 aaKnown RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 C2orf73Q8N5S3 287 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 FBXO15Q8NCQ5 510 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 C2CD4AQ8NCU7 369 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 GABPB2Q8TAK5 448 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 ADAMTS17Q8TE56 1095 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 MZB1Q8WU39 189 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 GBP5Q96PP8 586 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 SLC30A3Q99726 388 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 INTS9Q9NV88 658 aaKnown RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 TBK1Q9UHD2 729 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 TCFL5Q9UL49 500 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 SNX7Q9UNH6 387 aa12.67□□□□□ -0.38
ERCC3-209ENST00000494464 HEMK1Q9Y5R4 338 aaPredicted RBP12.67□□□□□ -0.38
ERCC3-209ENST00000494464 A0A1W2PPV9 198 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 KRT87PA6NCN2 255 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 TARM1B6A8C7 271 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 J3QKU1 62 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 SLC28A2O43868 658 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 RFPL1O75677 317 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 INHBAP08476 426 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 F7P08709 466 aaPredicted RBP12.66□□□□□ -0.38
ERCC3-209ENST00000494464 MPC1LP0DKB6 136 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 CBSLP0DN79 551 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 KRT15P19012 456 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 CBSP35520 551 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 MPP1Q00013 466 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 ZC3H12BQ5HYM0 836 aaKnown RBP12.66□□□□□ -0.38
ERCC3-209ENST00000494464 TTC19Q6DKK2 380 aaPredicted RBP12.66□□□□□ -0.38
ERCC3-209ENST00000494464 FCRL6Q6DN72 434 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 KIAA0408Q6ZU52 694 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 GALNT7Q86SF2 657 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 OR2L3Q8NG85 312 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 OR2A1Q8NGT9 310 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 OR9A1PQ8NGU1 263 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 CD200R1Q8TD46 325 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 DLG3Q92796 817 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 ZUFSPQ96AP4 578 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 ALKBH8Q96BT7 664 aaKnown RBP12.66□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF285Q96NJ3 590 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 AARSD1Q9BTE6 412 aaKnown RBP12.66□□□□□ -0.38
ERCC3-209ENST00000494464 SPRTNQ9H040 489 aaPredicted RBP12.66□□□□□ -0.38
ERCC3-209ENST00000494464 TSR3Q9UJK0 312 aaKnown RBP12.66□□□□□ -0.38
ERCC3-209ENST00000494464 PADI2Q9Y2J8 665 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 DHRS7Q9Y394 339 aa12.66□□□□□ -0.38
ERCC3-209ENST00000494464 GMNCA6NCL1 334 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 ZNF839A8K0R7 811 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 MKRN2OSH3BPM6 223 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 SUV39H1O43463 412 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 VPS26AO75436 327 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 HAUS5O94927 633 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 FAM107AO95990 144 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 CTSBP07858 339 aa12.65□□□□□ -0.38
ERCC3-209ENST00000494464 PSMB5P28074 263 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms